Job Description P39389 Confidence 99.91% Date Thu Jan 5 12:00:20 GMT 2012 Rank 139 Aligned Residues 297 % Identity 12% Template c3nysA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase wbpe; PDBTitle: x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas2 aeruginosa in complex with plp at 1.45 angstrom resolution Resolution 1.45 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	.	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I
Query Conservation																																																		.
Alig confidence																							.	.	.	.	.	.	.																					.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		Q	Y	I	L	G	P	E	V	T	E	L	E	D	R	L	A	D	F	V	G	A	.	.	.	.	.	.	.	K	Y	C	I	S	C	A	N	G	T	D	A	L	Q	I	V	Q	M	A	L	G	V	G	P	G	D	E	V	I	T	P	G	F	T	Y	V	A	T	A	E	T	V	A	L	L	G	A	K	P	V	Y	V
Template Known Secondary structure				S	S																T		.	.	.	.	.	.	.	S						S													T	T			T	T							S	S	S		T									T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W
Query Conservation
Alig confidence					.	.																										.	.									.	.	.																								.	.	.	.
Template Conservation					.	.																										.	.									.	.	.																								.	.	.	.
Template Sequence		D	I	D	.	.	P	R	T	Y	N	L	D	P	Q	L	L	E	A	A	I	T	P	R	T	K	A	I	I	P	V	.	.	S	L	Y	G	Q	C	A	D	.	.	.	F	D	A	I	N	A	I	A	S	K	Y	G	I	P	V	I	E	D	A	A	Q	S	F	.	.	.	.	G	A	S	Y	K	G	K	R	S	C
Template Known Secondary structure			B		.	.	T	T	T		S	B		G	G	G	T	G	G	G			T	T							B	.	.		G	G	G					.	.	.											T	T			B					T	T	T	T	.	.	.	.	T				T	T			T	T
Template Predicted Secondary structure					.	.																										.	.									.	.	.																								.	.	.	.
Template SS confidence
		103	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.														.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																			.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I
Query Conservation																			.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																							.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		N	L	S	T	V	A	C	T	S	F	F	P	S	A	P	L	G	C	Y	G	D	G	G	A	I	F	T	N	D	D	E	L	A	T	A	I	R	Q	I	A	R	H	G	Q	D	R	R	Y	H	H	I	R	V	G	V	N	S	R	L	D	T	L	Q	A	A	I	L	L	P	K	L	E	I	.	.	.	.	.	.	F
Template Known Secondary structure		S	S	S	S								T	T	S	S	S			S	S								S												T	B	T	T				T	T				S				B																	T	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																							.																																																				.	.	.	.	.	.	.
Template Conservation																							.
Template Sequence		E	E	E	I	A	L	R	Q	K	V	A	A	E	Y	D	L	S	L	K	Q	V	.	G	I	G	T	P	F	I	E	V	N	N	I	S	V	Y	A	Q	Y	T	V	R	M	D	N	R	E	S	V	Q	A	S	L	K	A	A	G	V	P	T	A	V	H	Y	P	I	P	L	N	K	Q	P	A	V	A	D	E	K	A
Template Known Secondary structure																						T	.	T								T	T						S	S						T	T												T				B		S		S	S		G	G	G	S	G	G	G			S	S	S
Template Predicted Secondary structure																							.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
											439	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	.	.	.	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G
Query Conservation		.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		K	L	P	V	G	D	K	A	A	T	Q	V	M	S	L	P	M	H	P	Y	L	D	T	A	S	I	K	I	I	C	A	A	L	T
Template Known Secondary structure																				T	T
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions