Job Description P39389 Confidence 99.93% Date Thu Jan 5 12:00:20 GMT 2012 Rank 116 Aligned Residues 300 % Identity 14% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.									190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	.	.	.	.	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	.	.	.	.	.	.	.	.	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I
Query Conservation																								.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.							.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.
Template Sequence		E	V	V	A	M	T	A	H	M	L	G	.	.	.	.	.	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A	T	K	G	I	T	A	P	E	A	V	V	P	V	S	A	H	A	A	F	D	K	A	A	Q	Y	F	G	I	K	L	V
Template Known Secondary structure											T	T	.	.	.	.	.	T	T	T	T	T	S								S	S																							S	S							T	T	S		T										T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.					290	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	.	.	.	.	Y	P	R	P
Query Conservation																																																																										.	.	.	.
Alig confidence																																		.	.									.	.	.																												.	.	.	.
Template Conservation																																		.	.									.	.	.
Template Sequence		R	T	P	L	D	A	D	Y	R	A	D	V	A	A	M	R	E	A	I	T	P	N	T	V	V	V	A	G	S	A	P	G	.	.	Y	P	H	G	V	V	D	P	.	.	.	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I	L	P	W	A	E	R	L	G	Y	P
Template Known Secondary structure					B		T	T	S	S	B											T	T								T	T		.	.	T	T	T						.	.	.												T								T	T	T	T	T	T						T	T	T
Template Predicted Secondary structure																																		.	.									.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.											.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.																.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	.	.	.	.	.	.	.	.	.	.	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H
Query Conservation																																.																.	.	.	.	.	.	.	.	.	.
Alig confidence																																.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	P	P	F	D	F	R	L	E	G	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	D	L	L	H	Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E
Template Known Secondary structure						S	T	T	S	T	T								T	T	T	T	T				S	S							S	S												S	S		T	T						S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L
Query Conservation
Alig confidence																										.	.																		.	.																									.	.	.	.	.	.	.
Template Conservation																										.	.																		.	.																									.	.	.	.	.	.	.
Template Sequence		E	G	Y	L	D	A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	.	.	P	S	L	K	I	L	G	D	P	L	W	V	I	A	V	A	S	.	.	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	R	.	.	.	.	.	.	.	P	P	A	F
Template Known Secondary structure																								T	S	.	.	T	T				S	S			S	S							.	.	S	S	S												T	T							T	T	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																										.	.																		.	.																									.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.			.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.								.	.	.	440
		443	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		R	I	N	C	A	.	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		H	V	A	L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V	A	Q	V	R	A
Template Known Secondary structure							G	G	G	S	S	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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