Job Description P39389 Confidence 95.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 314 Aligned Residues 63 % Identity 22% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		R	Y	Q	H	L	A	T	L	L	A	E	R	I	E	Q	G	L	Y	R	H	G	E	K	L	P	S	V	R	S	L	S	Q	E	H	G	V	S	I	S	T	V	Q	Q	A	Y	Q	T	L	E	T	M	K	L	I	T	P	Q	P	R	S	G	.	.	.	Y	F	V	A	Q
Query Conservation																																																															.	.	.
Alig confidence																	.								.	.																																					.	.	.
Template Conservation																	.								.	.
Template Sequence		L	L	K	A	X	A	N	E	R	R	L	Q	I	L	C	.	X	L	H	N	Q	E	L	.	.	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S
Template Known Secondary structure								S									.		T	T	T	S			.	.										T																T	T	S							T	T
Template Predicted Secondary structure																	.								.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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