Job Description P39389 Confidence 99.96% Date Thu Jan 5 12:00:20 GMT 2012 Rank 93 Aligned Residues 340 % Identity 15% Template c3islA_ PDB info PDB header:transferase Chain: A: PDB Molecule:purine catabolism protein pucg; PDBTitle: crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg)2 from bacillus subtilis Resolution 2.06 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		E	L	C	T	P	L	R	T	I	M	T	P	G	P	V	E	V	D	P	R	V	L	R	V	M	S	T	P	V	V	G	Q	F	D	P	A	F	T	G	I	M	N	E	T	M	E	M	L	R	E	L	F	Q	T	K	.	.	.	.	N	R	W	A	Y	P	I	D	G	T	S	R	A	G	I	E	A	V	L	A	S
Template Known Secondary structure												S	S	S	S											T	T	S					T	T	S																		T	T			.	.	.	.		S							S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	.	.	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A
Query Conservation																					.	.
Alig confidence																					.	.																																										.												.	.	.
Template Conservation																																																																.												.	.	.
Template Sequence		V	I	E	P	E	D	D	V	L	I	P	I	Y	G	R	F	G	Y	L	L	T	E	I	A	E	R	Y	G	A	N	V	H	M	L	E	C	E	W	G	T	V	F	D	P	E	D	I	I	R	E	I	K	K	V	K	P	K	I	V	A	M	V	.	H	G	E	T	S	T	G	R	I	H	P	.	.	.	L	K	A
Template Known Secondary structure					T	T								S	S													T	T										T	T																		S						.	S			T	T	T	T					.	.	.
Template Predicted Secondary structure																																																																.												.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.				.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																																																												.														.	.	.	.	.	.	.	.
Query SS confidence																																																												.														.	.	.	.	.	.	.	.
Query Sequence		V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	.	.	.	.	.	.	.	.
Query Conservation																																																												.														.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																										.														.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		I	G	E	A	C	R	T	E	D	A	L	F	I	V	D	A	V	A	T	I	G	G	C	E	V	K	.	.	.	.	.	.	.	V	D	E	W	K	I	D	A	A	I	G	G	T	Q	K	C	L	S	V	P	S	G	M	A	P	I	T	Y	N	E	R	V	A	D	V	I	A	A	R	N	R	P	I	T	S	N	Y
Template Known Secondary structure									T	T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	T	T	T	T	T		S						S	S	S	T	T				S	S																T						S		S	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
														337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																				.
Template Sequence		F	D	L	S	Q	L	E	D	Y	W	S	E	R	R	L	N	H	H	T	E	A	T	T	M	L	Y	A	L	R	E	G	V	R	L	.	V	L	E	E	G	L	E	T	R	F	E	R	H	R	H	H	E	A	A	L	A	A	G	I	K	A	M	G	L	R	L	F	G	D	D	S	C	K	M	P	V	V	T	C	V
Template Known Secondary structure		T									T	S	T	T				S	S																	.																											T	T			B		S		G	G	G	B		T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																				.																									.	.
Query SS confidence																				.																									.	.
Query Sequence		E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	.	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation																				.																									.	.
Alig confidence																				.															.	.	.	.							.	.
Template Conservation																																			.	.	.	.
Template Sequence		E	I	P	G	G	I	D	G	E	S	V	R	D	M	L	L	A	Q	F	G	I	E	I	A	S	S	F	G	P	L	A	G	K	.	.	.	.	I	W	R	I	G	T	M	G	Y	S	C	R	K	E	N	V	L	F	V	L	A	G	L	E	A	V	L	L	R
Template Known Secondary structure					T	T																			B				S	T	T	T	T	T	.	.	.	.								G	G	G		S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions