Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 13 Aligned Residues 373 % Identity 16% Template c3ihjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alanine aminotransferase 2; PDBTitle: human alanine aminotransferase 2 in complex with plp Resolution 2.30 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.
Query Sequence		D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	.	.	.	.	.	.	.	.	.	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S
Query Conservation																																																.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		G	E	I	E	L	E	L	Q	R	G	I	K	K	P	F	T	E	V	I	R	A	N	P	I	.	.	T	F	L	R	Q	V	M	A	L	C	T	Y	P	N	L	L	D	S	P	S	F	P	E	D	A	K	K	R	A	R	R	I	L	Q	A	C	S	Q	G	V	N	C	I	R	E	D	V	A	A	Y	I	T	R	R
Template Known Secondary structure										T	T				S	S	S	S		B						.	.													G	G	G	G	G		S	S	S																		S
Template Predicted Secondary structure																										.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
				163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.																															.	.	.	.																																		.	.
Query SS confidence		.	.																															.	.	.	.																																		.	.
Query Sequence		.	.	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	.	.	.	.	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	.	.	G	I	S	V	E	A	L	E	L
Query Conservation		.	.																															.	.	.	.																																		.	.
Alig confidence		.	.																															.	.	.	.																																		.	.
Template Conservation
Template Sequence		D	G	G	V	P	A	D	P	D	N	I	Y	L	T	T	G	A	S	D	G	I	S	T	I	L	K	I	L	V	S	G	G	G	K	S	R	T	G	V	M	I	P	I	P	Q	Y	P	L	Y	S	A	V	I	S	E	L	D	A	I	Q	V	N	Y	Y	L	D	E	E	N	C	W	A	L	N	V	N	E	L	R	R
Template Known Secondary structure		T	T	T					G	G	G					S	S																	G	G	G	S								S			T									T	T									B	G	G	G	T	T	B
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		235	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.										.	.	.	.	300	.	.
Predicted Secondary structure					.	.	.																																																											.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.																																																											.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	.	.	.	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	.	.	.	.	.	.	.	.	.	I	H	S	W	D	I	D
Query Conservation					.	.	.																																																											.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.																																																											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	Q	E	A	K	D	H	C	D	P	K	V	L	C	I	I	N	P	G	N	P	T	G	Q	V	Q	S	R	K	C	I	E	D	V	I	H	F	A	W	E	E	K	L	F	L	L	A	D	E	V	Y	Q	D	N	V	Y	S	P	D	C	R	F	H	S	F	K	K	V	L	Y	E	M	G	P	E	Y	S	S	N
Template Known Secondary structure							T	T	T	S									S	S		T	T	T																				T								T	T	T	T		B			T	T													T						T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		303	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.									360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.											.	.	.																																		.	.	.	.	.	.	.	.
Query SS confidence																.	.											.	.	.																																		.	.	.	.	.	.	.	.
Query Sequence		G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	.	P	G	L	R	V	G	W	V	A	P	.	.	.	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	.	.	.	.	.	.	.	.	H	Y	H	R	H	I	R	R	M	R
Query Conservation																.	.											.	.	.																																		.	.	.	.	.	.	.	.
Alig confidence																.	.											.	.	.																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	L	A	S	F	H	S	T	S	K	G	Y	M	G	E	C	G	Y	R	G	G	Y	M	E	V	I	N	L	H	P	E	I	K	G	Q	L	V	K	L	L	S	V	R	L	C	P	P	V	S	G	Q	A	A	M	D	I	V	V	N	P	P	V	A	G	E	E	S	F	E	Q	F	S	R	E	K	E	S	V	L
Template Known Secondary structure										S	S	S	S	T	T			S	S	S									S																S															T					T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.													.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																			.	.																				.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																			.	.
Template Sequence		G	N	L	A	K	K	A	K	L	T	E	D	L	F	N	Q	V	.	.	P	G	I	H	C	N	P	L	Q	G	A	M	Y	A	F	P	R	I	F	I	P	A	K	A	V	E	A	A	Q	A	H	Q	M	A	P	D	M	F	Y	C	M	K	L	L	E	E	T	G	I	C	V	V	P	G	S	G	F	G	Q	R	E
Template Known Secondary structure																	T	S	.	.	T	T								B	S	S																			T	T	S																B					G	G	G	T				T
Template Predicted Secondary structure																			.	.
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation
Alig confidence		.											.
Template Conservation		.											.
Template Sequence		.	G	T	Y	H	F	R	M	T	I	L	.	P	P	V	E	K	L	K	T	V	L	Q	K	V	K	D	F	H	I	N	F	L	E
Template Known Secondary structure		.	T			B							.	S
Template Predicted Secondary structure		.											.
Template SS confidence
			489	490	.	.	.	.	.	.	.	.		.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520