Job Description P39389 Confidence 99.92% Date Thu Jan 5 12:00:20 GMT 2012 Rank 131 Aligned Residues 343 % Identity 10% Template c3i4jC_ PDB info PDB header:transferase Chain: C: PDB Molecule:aminotransferase, class iii; PDBTitle: crystal structure of aminotransferase, class iii from2 deinococcus radiodurans Resolution 1.70 Å

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		103	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		D	S	S	I	V	P	L	S	K	S	T	.	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M
Query Conservation													.
Alig confidence													.																																																.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		G	R	R	Y	L	D	G	S	S	G	A	L	V	A	N	I	G	H	G	R	A	E	V	G	E	R	M	A	A	Q	A	A	R	L	P	F	V	H	G	S	Q	F	S	S	D	V	L	E	E	Y	A	G	R	L	A	R	F	V	G	.	.	.	.	.	L	P	T	F	R	F	W	A	V	S	G	G	S	E	A	T
Template Known Secondary structure								T	T					T		T	T		B																					T	T	T																	T	T	.	.	.	.	.		T	T							S	S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		182	.	.	.	.									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																																									.											.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																																									.											.	.	.	.
Query Sequence		S	L	A	L	M	.	.	.	.	.	.	.	.	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	.	I	S	V	E	A	L	E	L	A	L	.	.	.	.	E	Q	W	P	I	K	G	I	I	L	V	P
Query Conservation							.	.	.	.	.	.	.	.																																									.											.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																																									.											.	.	.	.
Template Conservation
Template Sequence		E	S	A	V	K	L	A	R	Q	Y	H	V	E	R	G	E	P	G	R	F	K	V	I	T	R	V	P	S	R	E	L	Y	T	P	L	M	R	P	E	A	W	P	K	L	P	K	P	D	P	A	R	N	G	A	E	D	A	E	G	L	R	A	L	L	E	R	E	G	P	E	T	V	A	A	F	M	A	E	P	V
Template Known Secondary structure															T	T		T	T								T	T			T	T	T	G	G	G	G	S	G	G	G									T	T	S							T											G	G	G								S	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.		.	.	.
Predicted Secondary structure																																																																						.								.
Query SS confidence																																																																						.								.
Query Sequence		N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	.	V	A	P
Query Conservation																																																																						.								.
Alig confidence																																																												.	.	.								.								.
Template Conservation																																																												.	.	.
Template Sequence		V	G	A	S	D	A	A	L	A	P	A	P	G	Y	Y	E	R	V	R	D	I	C	D	E	A	G	I	I	F	I	A	D	E	V	M	S	G	M	G	R	C	G	S	P	L	A	L	S	R	W	S	G	V	T	P	D	I	A	.	.	.	V	L	G	K	G	L	A	A	G	Y	A	P	L	A	G	L	L	A	A
Template Known Secondary structure				G	G	G	T	T					T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T	T				S			.	.	.				G	G	G	T	T	T	S	S
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		G	R	Y	H	D	K	L	M	H	M	.	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E
Query Conservation												.
Alig confidence												.																																																			.	.	.
Template Conservation																																																															.	.	.
Template Sequence		P	Q	V	Y	E	T	V	M	G	G	F	M	H	G	F	T	Y	A	G	H	P	V	S	V	A	A	G	L	S	V	L	D	I	V	E	R	E	D	L	T	G	A	A	K	E	R	G	A	Q	L	L	A	G	L	Q	A	L	Q	A	R	F	.	.	.	P	Q	M	M	Q	V	R	G	T	G	L	L	L	G	V	V
Template Known Secondary structure																	T	T	T	T																		T	T																								.	.	.	T	T								T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.				.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M
Query Conservation																																												.
Alig confidence						.																			.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation						.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	D	L	.	I	A	S	R	I	G	A	A	A	L	K	R	G	L	I	T	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	H	L	L	L	G	P	P	L	S	I	T	A	A	E	V	D	G	L	L	A	L	L	A	G	A	L	E	D	V	L
Template Known Secondary structure						.													T	B					.	.	.	.	.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure						.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.													.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions