Job Description P39389 Confidence 99.75% Date Thu Jan 5 12:00:20 GMT 2012 Rank 215 Aligned Residues 340 % Identity 15% Template c3h7fB_ PDB info PDB header:transferase Chain: B: PDB Molecule:serine hydroxymethyltransferase 1; PDBTitle: crystal structure of serine hydroxymethyltransferase from2 mycobacterium tuberculosis Resolution 1.50 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	.	.	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K
Query Conservation																																						.	.
Alig confidence																																						.	.																													.
Template Conservation																																																																				.
Template Sequence		I	A	S	E	N	F	V	P	R	A	V	L	Q	A	Q	G	S	V	L	T	N	K	Y	A	E	G	L	P	G	R	R	Y	Y	G	G	C	E	H	V	D	V	V	E	N	L	A	R	D	R	A	K	A	L	F	G	A	E	F	A	N	V	Q	P	H	S	G	.	A	Q	A	N	A	A	V	L	H	A	L	M	S
Template Known Secondary structure			T	T													T	S	G	G	G	G							T	T			S	S	S																					T		S							S	S		.
Template Predicted Secondary structure																																																																				.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																									.
Query SS confidence														.	.	.	.	.																									.
Query Sequence		P	G	D	I	V	A	V	E	S	P	C	Y	.	.	.	.	.	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	.	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R
Query Conservation														.	.	.	.	.																									.
Alig confidence														.	.	.	.	.																									.																							.	.	.									.	.	.
Template Conservation																																																																		.	.	.									.	.	.
Template Sequence		P	G	E	R	L	L	G	L	D	L	A	N	G	G	H	L	T	H	G	M	R	L	N	F	S	G	K	L	Y	E	N	G	F	Y	G	V	D	P	A	T	H	L	I	D	M	D	A	V	R	A	T	A	L	E	F	R	P	K	V	I	I	A	G	W	.	.	.	S	A	Y	P	R	V	L	D	.	.	.	F	A
Template Known Secondary structure		T	T								G	G	G	T			G	G	G	T		T	T	S					S	S									T	T	T		S																S							.	.	.	S	S			S				.	.	.
Template Predicted Secondary structure																																																																		.	.	.									.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180				.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	.	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F
Query Conservation																							.
Alig confidence																							.																.	.	.	.	.									.
Template Conservation																																							.	.	.	.	.									.
Template Sequence		A	F	R	S	I	A	D	E	V	G	A	K	L	L	V	D	M	A	H	F	A	G	L	V	A	A	G	L	H	P	S	P	V	P	H	A	D	.	.	.	.	.	V	V	S	T	T	V	H	T	.	L	G	G	G	R	S	G	L	I	V	G	K	Q	Q	Y	A	K	A	I	N	S	A	V	F	P	G	Q	Q	G
Template Known Secondary structure											T								T	T	T						T	T	S	S			S	T	T	T		S	.	.	.	.	.									.					S								G	G	G									T	T	T	T		S
Template Predicted Secondary structure																																							.	.	.	.	.									.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		344	.	.	.	.	.					350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.																																																												.
Query SS confidence								.	.	.	.																																																												.
Query Sequence		N	V	P	S	T	Q	.	.	.	.	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	.	Q	V	D	M	V	C	V	A	R	Q
Query Conservation								.	.	.	.																																																												.
Alig confidence								.	.	.	.																																											.																	.
Template Conservation																																																						.
Template Sequence		G	P	L	M	H	V	I	A	G	K	A	V	A	L	K	I	A	A	T	P	E	F	A	D	R	Q	R	R	T	L	S	G	A	R	I	I	A	D	R	L	M	A	P	D	V	A	K	A	G	V	S	V	.	V	S	G	G	T	D	V	H	L	V	L	V	D	L	R	D	S	P	L	D	G	Q	A	A	E	D	L
Template Known Secondary structure		S																	T	S																						S	S						T	T				.	G	G	G	S		S	S	S							T	T	S	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																		.	.														.	.	.	.	.
Query SS confidence																		.	.														.	.	.	.	.
Query Sequence		L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	.	.	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	.	.	.	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y
Query Conservation																		.	.														.	.	.	.	.
Alig confidence																		.	.														.	.	.	.	.
Template Conservation
Template Sequence		L	H	E	V	G	I	T	V	N	R	N	A	V	P	N	D	P	R	P	P	M	V	T	S	G	L	R	I	G	T	P	A	L	A	T	R	G	F	G	D	T	E	F	T	E	V	A	D	I	I	A	T	A	L	A
Template Known Secondary structure					T	T									T	T		S	S		T	T	T		S													T
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions