Job Description P39389 Confidence 99.89% Date Thu Jan 5 12:00:20 GMT 2012 Rank 159 Aligned Residues 298 % Identity 13% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	.	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I
Query Conservation																																																		.
Alig confidence																				.	.	.	.	.	.	.																								.
Template Conservation																				.	.	.	.	.	.	.
Template Sequence		W	F	I	L	G	D	E	D	K	K	F	E	Q	E	F	A	D	Y	.	.	.	.	.	.	.	C	N	V	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L	K	G	Y	D	I	G	F	G	D	E	V	I	V	P	S	N	T	F	I	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V
Template Known Secondary structure				S	S															.	.	.	.	.	.	.	T	T	S	S						S													T	T			T	T							T	T	S											T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W
Query Conservation
Alig confidence					.	.																										.	.									.	.	.																								.	.	.	.
Template Conservation					.	.																										.	.									.	.	.																								.	.	.	.
Template Sequence		E	P	D	.	.	I	R	T	Y	N	I	D	P	S	L	I	E	S	A	I	T	E	K	T	K	A	I	I	A	V	.	.	H	L	Y	G	Q	P	A	D	.	.	.	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q	A	H	.	.	.	.	G	S	L	Y	K	G	M	K	V	G
Template Known Secondary structure					.	.	T	T	T	T				G	G	G	T	G	G	G			T	T								.	.		G	G	G	S				.	.	.											T	T								T	T		T	.	.	.	.	T				T	T			T	T
Template Predicted Secondary structure					.	.																										.	.									.	.	.																								.	.	.	.
Template SS confidence
		104	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340													.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																			.																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	.	.	.	.	.	.	.	.	.	.	.	.	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R
Query Conservation																			.																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																									.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		S	L	G	D	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V	V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	A	G	F	L	R	V	.	.	.	.	.	K	L	K	Y	L	D
Template Known Secondary structure		S	S	S	S								T	T	S	T	T			S	S								S													B	T	T		S	B	T	T	B			S				B														.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.																															.	.	.	.	.	.	.
Query SS confidence																																												.																															.	.	.	.	.	.	.
Query Sequence		R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	.	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	.	.	.	.	.	.	.
Query Conservation																																												.																															.	.	.	.	.	.	.
Alig confidence																						.	.																					.																															.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	.	.	N	V	I	I	P	V	E	A	D	Y	A	K	H	V	W	Y	T	F	V	I	R	S	E	K	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L	I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F
Template Known Secondary structure																				B	T	.	.	T	B	B						T	T						S							T	T											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G
Template Predicted Secondary structure																						.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
														439	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	R	N	C	L	R	I	N	C	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I	W	Y	G	M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure			T	T	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions