Job Description P39389 Confidence 99.95% Date Thu Jan 5 12:00:20 GMT 2012 Rank 100 Aligned Residues 336 % Identity 10% Template c3ffrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase serc; PDBTitle: crystal structure of a phosphoserine aminotransferase serc (chu_0995)2 from cytophaga hutchinsonii atcc 33406 at 1.75 a resolution Resolution 1.75 Å

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		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	.	.	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S
Query Conservation																																												.	.
Alig confidence												.	.	.	.																													.	.																		.	.	.	.
Template Conservation												.	.	.	.																																																.	.	.	.
Template Sequence		X	N	N	K	I	Y	F	T	P	G	.	.	.	.	P	S	E	L	Y	P	T	V	R	Q	H	X	I	T	A	L	D	E	K	I	G	V	I	S	H	R	S	K	K	F	E	E	V	Y	K	T	A	S	D	N	L	K	T	L	L	E	L	.	.	.	.	P	S	N	Y	E	V	L	F	L	A	S	A	T	E	I
Template Known Secondary structure										S	S	.	.	.	.	S					T	T											T	T	T	T	T	S		T	T	S																		T	T		.	.	.	.		T	T							S
Template Predicted Secondary structure												.	.	.	.																																																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10					.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D
Query Conservation
Alig confidence																																																							.	.	.												.												.
Template Conservation																																																							.	.	.												.												.
Template Sequence		W	E	R	I	I	Q	N	C	V	E	K	K	S	F	H	C	V	N	G	S	F	S	K	R	F	Y	E	F	A	G	E	L	G	R	E	A	Y	K	E	E	A	A	F	G	K	G	F	Y	P	A	D	I	T	.	.	.	V	P	A	D	A	E	I	I	C	L	T	.	H	N	E	T	S	S	G	V	S	X	P	.
Template Known Secondary structure											S	S								S													T	T										T	T					G	G	G			.	.	.			T	T								.	S			T	T	T	T					.
Template Predicted Secondary structure																																																							.	.	.												.												.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.																														.	.	.	.	.	.	.	.																																					.	.	.	.	.
Template Conservation		.	.																														.	.	.	.	.	.	.	.
Template Sequence		.	.	V	E	D	I	N	T	F	R	D	K	N	K	D	A	L	I	F	V	D	A	V	S	S	L	P	Y	P	K	F	.	.	.	.	.	.	.	.	D	W	T	K	I	D	S	V	F	F	S	V	Q	C	F	G	L	P	A	G	L	G	V	W	I	L	N	D	R	V	I	E	K	S	K	A	L	L	A	K	R
Template Known Secondary structure		.	.					T	T	S	G	G	G	S	T	T	S							T	T	T	T	T	S	S			.	.	.	.	.	.	.	.		T	T	S		S													S																					T	T
Template Predicted Secondary structure		.	.																														.	.	.	.	.	.	.	.
Template SS confidence
				148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
																	336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	I	G	T	Y	H	T	I	P	S	X	L	E	K	A	R	V	N	Q	T	P	E	T	P	N	A	X	N	I	F	L	L	G	K	V	T	G	D	X	L	Q	I	S	A	D	G	I	R	K	Q	T	E	E	K	A	A	L	I	N	T	Y	I	E	S	S	K	V	F	S	F	G	V	E	D	A	K	L	R	S
Template Known Secondary structure						S	T	T	S									T	T	T			S	S																																												S	S				S	S	S		G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V
Query Conservation																																																.
Alig confidence																																						.	.	.	.							.
Template Conservation																																						.	.	.	.
Template Sequence		X	T	T	I	V	A	N	T	T	X	L	P	G	E	I	N	K	I	L	E	P	F	D	X	A	V	G	A	G	Y	G	S	K	K	E	T	.	.	.	.	Q	I	R	I	A	N	F	P	A	H	S	L	E	Q	V	H	K	L	V	Q	T	L	K	E	K	I
Template Known Secondary structure		S	S							S	S										G	G	G	T							S	G	G	G	T	T	T	.	.	.	.								T	T	S																T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions