Job Description P39389 Confidence 99.63% Date Thu Jan 5 12:00:20 GMT 2012 Rank 245 Aligned Residues 277 % Identity 13% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	.	.	.	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V
Query Conservation																																																								.	.	.
Alig confidence																											.															.	.	.	.	.	.	.								.	.	.
Template Conservation																											.															.	.	.	.	.	.	.
Template Sequence		L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	E	.	G	R	D	T	L	E	R	V	Y	A	S	V	F	K	.	.	.	.	.	.	.	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L	Y
Template Known Secondary structure								T	T			G	G	G	G					T	T		T	T			.														T	.	.	.	.	.	.	.		S						T	T	S		S															T	T
Template Predicted Secondary structure																											.															.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.												.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	P	C	Y	Y	G	S	M	Q	M	.	.	.	.	.	.	.	.	.	.	.	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																																										.
Template Conservation																																																																	.
Template Sequence		I	T	G	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	.	G	Y	A	D	R	P	S	F	T	I	E	K	I	K	E	X
Template Known Secondary structure			S	S	S			T	T						T	S	S		S	S	S			T	G	G	G	T										T	T	S	S												T	T									S		.	T	T	S	S	S
Template Predicted Secondary structure																																																																	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		267	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.			.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure										.	.																																													.	.										.
Query SS confidence										.	.																																													.	.										.
Query Sequence		L	S	L	A	Q	R	H	D	.	.	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	.	.	L	R	V	G	W	V	A	P	G	.	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S
Query Conservation										.	.																																													.	.										.
Alig confidence										.	.																			.	.	.	.	.	.	.															.					.	.										.
Template Conservation																														.	.	.	.	.	.	.															.
Template Sequence		V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	R	I	E	P	.	.	.	.	.	.	.	T	E	V	G	A	D	I	I	A	G	S	L	I	N	.	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V	D	L	C	G	Y	R	L	T	T	P	G
Template Known Secondary structure										T	T	S							T	T	T	T	T	T	S	S			G	.	.	.	.	.	.	.	G	G	T	T		S									.	T	T	T	T	T			S																			S		T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.															.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		342	.					.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.					.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure				.	.	.	.																																																						.	.	.	.
Query SS confidence				.	.	.	.																																																						.	.	.	.
Query Sequence		S	F	.	.	.	.	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	.	.	.	.	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V
Query Conservation				.	.	.	.																																																						.	.	.	.
Alig confidence				.	.	.	.																.	.	.	.	.	.																							.	.	.								.	.	.	.
Template Conservation																							.	.	.	.	.	.																							.	.	.
Template Sequence		I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	.	.	.	.	.	.	A	P	H	V	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	.	.	.	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S	K	D	K	X	I
Template Known Secondary structure		T	G	G	G					T	T												.	.	.	.	.	.																						T	.	.	.	T					S		T	T	S			S	S	S							S
Template Predicted Secondary structure																							.	.	.	.	.	.																							.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	A	R	Q	L	C	R	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	A	Q	A	I	Q	A	A	S
Template Known Secondary structure										T	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions