Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 2 Aligned Residues 357 % Identity 20% Template c3ez1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase mocr family; PDBTitle: crystal structure of putative aminotransferase (mocr family)2 (yp_604413.1) from deinococcus geothermalis dsm 11300 at 2.60 a3 resolution Resolution 2.60 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																	.	.																						.
Query SS confidence																	.	.																						.
Query Sequence		V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	.	.	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	.	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L
Query Conservation																	.	.																						.
Alig confidence																	.	.																						.																			.	.	.	.	.
Template Conservation																																																											.	.	.	.	.
Template Sequence		L	N	X	Q	R	G	Q	P	A	D	A	D	F	D	L	S	N	G	L	L	T	V	L	G	A	E	D	V	R	X	D	G	L	D	L	R	N	Y	P	G	G	V	A	G	L	P	S	A	R	A	L	F	A	G	Y	L	D	.	.	.	.	.	V	K	A	E	N	V	L	V	W	N	N	S	S	L	E	L	Q	G
Template Known Secondary structure				S												T	T	G	G	G	G	G	S			G	G	G				T	T			T	T	S	S		S		T	T													T	T	.	.	.	.	.	S		G	G	G					S	S
Template Predicted Secondary structure																																																											.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.						.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		184	.														.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Query Sequence		A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	.	P	I	K	G	I	I	L	V	P	N
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																																							.																.
Template Conservation																																																							.
Template Sequence		L	V	L	T	F	A	L	L	H	G	V	R	G	S	T	G	P	W	L	S	Q	T	P	K	X	I	V	T	V	P	G	Y	D	R	H	F	L	L	L	Q	T	L	G	F	E	L	L	T	V	D	X	Q	S	.	D	G	P	D	V	D	A	V	E	R	L	A	G	T	D	P	S	V	K	G	I	L	F	V	P	T
Template Known Secondary structure										T			T	T		S	S		G	G	G	G									S													T										T	.	T													S		T	T								S	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																						.																												.	.	.	.	.	.	.
Query SS confidence																						.																												.	.	.	.	.	.	.
Query Sequence		C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	.	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	.	.	.	.	.	.	.	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V
Query Conservation																						.																												.	.	.	.	.	.	.
Alig confidence																						.																												.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	N	P	G	G	E	T	I	S	L	E	K	A	R	R	L	A	G	L	Q	A	A	A	P	D	F	T	I	F	A	D	D	A	Y	R	V	H	H	L	V	E	E	D	R	A	E	P	V	N	F	V	V	L	A	R	D	A	G	Y	P	D	R	A	F	V	F	A	S	T	S	K	I	T	F	A	G	A	G	L
Template Known Secondary structure		S		T	T	T														T				S	S	T	T								T	T	S	S		B			S	S	S															T		T	T	S							S	T	T	T	S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		322	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.				390	.	.	.	.	.
Predicted Secondary structure				.																																				.	.																																.	.	.
Query SS confidence				.																																				.	.																																.	.	.
Query Sequence		G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	.	.	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	.	.	.	E	I	C	I	T	R
Query Conservation				.																																				.	.																																.	.	.
Alig confidence				.																																				.	.																																.	.	.
Template Conservation
Template Sequence		G	F	V	A	S	S	E	D	N	I	R	W	L	S	K	Y	L	G	A	Q	S	I	G	P	N	K	V	E	Q	A	R	H	V	K	F	L	T	E	Y	P	G	G	L	E	G	L	X	R	D	H	A	A	I	I	A	P	K	F	R	A	V	D	E	V	L	R	A	E	L	G	E	G	G	E	Y	A	T	W	T	L
Template Known Secondary structure																					S		S																	S	T	T																													T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.			.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	.	.	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation																																									.	.
Alig confidence																.																									.	.
Template Conservation																.
Template Sequence		P	K	G	G	Y	F	I	S	L	D	T	A	E	P	.	V	A	D	R	V	V	K	L	A	E	A	A	G	V	S	L	T	P	A	G	A	T	Y	P	A	G	Q	D	P	H	N	R	N	L	R	L	A	P	T	R	P	P	V	E	E	V	R	T	A	X	Q	V	V	A	A	C	I	R	L	A	T	E
Template Known Secondary structure			S	B	S	S							S	S	S	.												T	T						T	T	T	T	S	S	T	T			S	S	S								S	S	S
Template Predicted Secondary structure																.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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