Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 59 Aligned Residues 361 % Identity 20% Template c3dydB_ PDB info PDB header:transferase Chain: B: PDB Molecule:tyrosine aminotransferase; PDBTitle: human tyrosine aminotransferase Resolution 2.30 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	.	.	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S
Query Conservation																						.	.
Alig confidence																						.	.																		.	.
Template Conservation																																									.	.
Template Sequence		V	K	P	N	P	N	K	T	M	I	S	L	S	I	G	D	P	T	V	F	G	N	L	P	T	D	P	E	V	T	Q	A	M	K	D	A	L	D	S	.	.	G	K	Y	N	G	Y	A	P	S	I	G	F	L	S	S	R	E	E	I	A	S	Y	Y	H	C	P	E	A	P	L	E	A	K	D	V	I	L	T	S
Template Known Secondary structure						T	T	S					S					T	T	T	T	S	S	S																	.	.	T		S	S	S				T	T															B	T	T	B				G	G	G					S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	C	S	Q	A	I	D	L	C	L	A	V	L	A	N	P	G	Q	N	I	L	V	P	R	P	G	F	S	L	Y	K	T	L	A	E	S	M	G	I	E	V	K	L	Y	N	L	L	P	E	K	S	W	E	I	D	L	K	Q	L	E	Y	L	I	D	E	K	T	A	C	L	I	V	N	N	P	S	N	P	C	G
Template Known Secondary structure																	T	T								S			T									T	T										G	G	G	T	T													T	T								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.													.	.	.	.	.	.
Query SS confidence																																																															.													.	.	.	.	.	.
Query Sequence		F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	R	.	.	.	.	.	.
Query Conservation																																																															.													.	.	.	.	.	.
Alig confidence																																																															.													.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	F	S	K	R	H	L	Q	K	I	L	A	V	A	A	R	Q	C	V	P	I	L	A	D	E	I	Y	G	D	M	V	F	S	D	C	K	Y	E	P	L	A	T	L	S	T	D	V	P	I	L	S	C	G	G	L	A	K	R	W	L	V	P	G	W	R	L	G	W	I	L	I	H	D	R	R	D	I	F	G
Template Known Secondary structure																				T								T	T	T	T		B		S	S	S					G	G	G	G		S	S									S	T	T	T	T	T		G	G	G											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	.	.
Query Conservation																																																																																.	.
Alig confidence																																																												.	.																			.	.
Template Conservation																																																												.	.
Template Sequence		N	E	I	R	D	G	L	V	K	L	S	Q	R	I	L	G	P	C	T	I	V	Q	G	A	L	K	S	I	L	C	R	T	P	G	E	F	Y	H	N	T	L	S	F	L	K	S	N	A	D	L	C	Y	G	A	L	A	A	I	.	.	P	G	L	R	P	V	R	P	S	G	A	M	Y	L	M	V	G	I	E	M
Template Known Secondary structure																		S															S																									T	S	.	.	T	T								B	T	T								G
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
					407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																	.
Query SS confidence		.	.	.																	.
Query Sequence		.	.	.	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation		.	.	.																	.
Alig confidence		.	.	.																	.															.	.	.	.								.
Template Conservation																																				.	.	.	.								.
Template Sequence		E	H	F	P	E	F	E	N	D	V	E	F	T	E	R	L	V	A	E	Q	S	V	H	C	L	P	A	T	C	F	E	Y	P	N	.	.	.	.	F	I	R	V	V	I	T	.	V	P	E	V	M	M	L	E	A	C	S	R	I	Q	E	F	C	E	Q
Template Known Secondary structure		G	G		T	T		S	S																			G	G	G	G	T		T	T	.	.	.	.						S		.	S
Template Predicted Secondary structure																																				.	.	.	.								.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions