Job Description P39389 Confidence 99.90% Date Thu Jan 5 12:00:20 GMT 2012 Rank 153 Aligned Residues 311 % Identity 15% Template c3dr4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand Resolution 1.60 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	.	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q
Query Conservation																																																														.
Alig confidence																																			.	.	.	.	.	.	.																					.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		R	D	Y	V	L	E	C	M	D	T	T	W	I	S	S	V	G	R	F	I	V	E	F	E	K	A	F	A	D	Y	C	G	V	.	.	.	.	.	.	.	K	H	A	I	A	C	N	N	G	T	T	A	L	H	L	A	L	V	A	M	G	I	G	P	G	D	E	V	I	V	P	S	L	T	Y	I	A	S	A	N
Template Known Secondary structure												T			S	S		S															T		.	.	.	.	.	.	.	S						S														T			T	T							S	S	S		T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A
Query Conservation
Alig confidence																				.	.																							.	.									.	.	.																								.	.
Template Conservation																				.	.																							.	.									.	.	.																								.	.
Template Sequence		S	V	T	Y	C	G	A	T	P	V	L	V	D	N	D	P	R	T	.	.	F	N	L	D	A	A	K	L	E	A	L	I	T	P	R	T	K	A	I	M	P	V	.	.	H	L	Y	G	Q	I	C	D	.	.	.	M	D	P	I	L	E	V	A	R	R	H	N	L	L	V	I	E	D	A	A	E	A	V	.	.
Template Known Secondary structure						T	T								B		T	T	T	.	.		S	B		G	G	G	T	G	G	G			T	T							B	.	.		G	G	G					.	.	.											T	T								T	T		T	.	.
Template Predicted Secondary structure																				.	.																							.	.									.	.	.																								.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	F	N	V	P	S	T	Q	M	A	A
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	A	T	Y	R	G	K	K	S	G	S	L	G	D	C	A	T	F	S	F	F	G	N	A	I	I	T	T	G	E	G	G	M	I	T	T	N	D	D	D	L	A	A	K	M	R	L	L	R	G	Q	G	M	D	P	N	R	R	Y	W	F	P	I	V	G	F	N	Y	R	M	T	N	I	Q	A	A	I	G
Template Known Secondary structure		.	.	T				T	T			T	T	S	S	S	S							B	T	T	S	S	S			B	S							S													B	T	T			T	T	S	T	T			S	S				B		B
Template Predicted Secondary structure		.	.
Template SS confidence
				163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.									400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.
Query Sequence		A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	.	.	.	.	.	.	.	.	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I
Query Conservation																																																	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																							.	.												.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.																							.	.
Template Sequence		L	A	Q	L	E	R	.	.	.	.	.	.	V	D	E	H	L	A	A	R	E	R	V	V	G	W	Y	E	Q	K	L	A	R	L	.	.	G	N	R	V	T	K	P	H	V	A	L	T	G	R	H	V	F	W	M	Y	T	V	R	L	G	E	G	L	S	T	T	R	D	Q	V	I	K	D	L	D	A	L	G	I
Template Known Secondary structure							T	.	.	.	.	.	.																			G	G	G	G	.	.	G	G	G								T	T	S					S	S							T	T		S	S												T	T	B
Template Predicted Secondary structure								.	.	.	.	.	.																							.	.
Template SS confidence
		241	.	.	.	.	.							.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		425	.	.	.	.	430	.	.	.	.	.	.	.	.																	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Query Sequence		Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	C	L	R	I	N	C	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation
Template Sequence		E	S	R	P	V	F	H	P	M	H	I	M	P	P	Y	A	H	L	A	T	D	D	L	K	I	A	E	A	C	G	V	D	G	L	N	L	P	T	H	A	G	L	T	E	A	D	I	D	R	V	I	A	A	L	D	Q	V	L
Template Known Secondary structure										G	G	G	S	G	G	G	G	G	G			T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions