Job Description P39389 Confidence 99.82% Date Thu Jan 5 12:00:20 GMT 2012 Rank 190 Aligned Residues 321 % Identity 12% Template c3dodA_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 bacillus subtilis Resolution 1.90 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.
Query Sequence		P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	.	.	.	.	.	.	.	.	P	G	D	I
Query Conservation																																																																						.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		E	L	D	D	A	I	K	K	Q	L	G	K	I	A	H	S	T	L	L	G	M	T	N	V	P	A	T	Q	L	A	E	T	L	I	D	I	S	P	.	.	.	.	.	K	K	L	T	R	V	F	Y	S	D	S	G	A	E	A	M	E	I	A	L	K	M	A	F	Q	Y	W	K	N	I	G	K	P	E	K	Q	K
Template Known Secondary structure												T	T		S					S	S	S																S		.	.	.	.	.	T	T								S	S																			T	T		T	T
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																	.	.																	.
Query SS confidence																																																	.	.																	.
Query Sequence		V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	.	.	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	.	M	P	D	A	R	K	R	A	V	L	S	L	A	Q
Query Conservation																																																	.	.																	.
Alig confidence																														.	.	.	.	.															.	.																	.
Template Conservation																														.	.	.	.	.
Template Sequence		F	I	A	M	K	S	Y	K	A	P	I	P	Y	V	Y	R	S	E	S	G	D	P	D	E	C	R	D	Q	.	.	.	.	.	C	L	R	E	L	A	Q	L	L	E	E	H	H	E	E	I	A	A	L	S	I	E	S	M	V	Q	G	A	S	G	M	I	V	M	P	E	G	Y	L	A	G	V	R	E	L	C	T
Template Known Secondary structure																T	T	S	S	S										.	.	.	.	.													G	G	G								S	S			S	T	T	T						T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.
Query Sequence		R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	.	.	.	.	.	.	.	S	S	F	N
Query Conservation																																																																							.	.	.	.	.	.	.
Alig confidence																									.	.																																													.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		T	Y	D	V	L	M	I	V	D	E	V	A	T	G	F	G	R	T	G	K	M	F	A	.	.	C	E	H	E	N	V	Q	P	D	L	M	A	A	G	K	G	I	T	G	G	Y	L	P	I	A	V	T	F	A	T	E	D	I	Y	K	A	F	Y	D	D	Y	E	N	L	K	T	F	F	H	G	H	S	Y	T	G
Template Known Secondary structure			T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	.	.	G	G	G	G	T				S						G	G	G	G	T	T	S	S														T	T		S		G	G	G									T	T	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.												.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	.	.	.	.	.	.	.	.	.	.	.	M	V
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		N	Q	L	G	C	A	V	A	L	E	N	L	A	L	.	.	.	.	F	E	S	E	N	I	V	E	Q	V	A	E	K	S	K	K	L	H	F	L	L	Q	D	L	H	A	L	P	H	V	G	D	I	R	Q	L	G	F	M	C	G	A	E	L	V	R	S	K	E	T	K	E	P	Y	P	A	D	R	R	I	G	Y
Template Known Secondary structure																.	.	.	.				T	T																				T	T	S	T	T								T	T								S	B	T	T	T	T	B				G	G	G
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.					.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A
Query Conservation																																				.
Alig confidence																		.	.	.	.	.	.	.	.	.										.
Template Conservation																		.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	L	K	M	R	E	L	G	M	L	T	R	P	L	.	.	.	.	.	.	.	.	.	G	D	V	I	A	F	L	P	P	L	A	S	T	A	E	E	L	S	E	M	V	A	I	M	K	Q	A	I	H	E	V
Template Known Secondary structure										T	T							.	.	.	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.										.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions