Job Description P39389 Confidence 99.97% Date Thu Jan 5 12:00:20 GMT 2012 Rank 83 Aligned Residues 335 % Identity 13% Template c2z9wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate aminotransferase; PDBTitle: crystal structure of pyridoxamine-pyruvate aminotransferase complexed2 with pyridoxal Resolution 1.70 Å

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L
Query Conservation
Alig confidence											.						.	.	.	.	.	.	.																																				.	.	.	.	.
Template Conservation											.						.	.	.	.	.	.	.																																				.	.	.	.	.
Template Sequence		D	P	V	I	T	L	T	A	G	.	P	V	N	A	Y	.	.	.	.	.	.	.	P	E	V	L	R	G	L	G	R	T	V	L	Y	D	Y	D	P	A	F	Q	L	L	Y	E	K	V	V	D	K	A	Q	K	A	M	R	.	.	.	.	.	L	S	N	K	P	V	I	L	H	G	E	P	V	L	G	L	E	A
Template Known Secondary structure				S					S	S	.	S					.	.	.	.	.	.	.							T	T	S					T	T	S																		T	T	.	.	.	.	.		S	S						S	S		T
Template Predicted Secondary structure											.						.	.	.	.	.	.	.																																				.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.		.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	.	.	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A
Query Conservation																						.	.
Alig confidence																						.	.																																																									.	.
Template Conservation																																																																																.	.
Template Sequence		A	A	A	S	L	I	S	P	D	D	V	V	L	N	L	A	S	G	V	Y	G	K	G	F	G	Y	W	A	K	R	Y	S	P	H	L	L	E	I	E	V	P	Y	N	E	A	I	D	P	Q	A	V	A	D	M	L	K	A	H	P	E	I	T	V	V	S	V	C	H	H	D	T	P	S	G	T	I	N	P	.	.
Template Known Secondary structure									T	T								S	S															S									T	T	S															T	T								S			G	G	G	T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence		.																														.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation		.																														.	.	.	.	.	.	.
Template Sequence		.	I	D	A	I	G	A	L	V	S	A	H	G	A	Y	L	I	V	D	A	V	S	S	F	G	G	M	K	T	H	.	.	.	.	.	.	.	P	E	D	C	K	A	D	I	Y	V	T	G	P	N	K	C	L	G	A	P	P	G	L	T	M	M	G	V	S	E	R	A	W	A	K	M	K	A	N	P	L	A	P
Template Known Secondary structure		.											T	T								T	T	T	B	T	T	B	S			.	.	.	.	.	.	.	G	G	G	T	T		S						S	S	S	T	T				S																	T		T	T	S
Template Predicted Secondary structure		.																														.	.	.	.	.	.	.
Template SS confidence
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.										.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		R	A	S	M	L	S	I	V	D	W	E	N	A	W	S	R	D	K	P	F	P	F	T	P	S	V	S	E	I	N	G	L	D	V	A	L	D	L	Y	L	N	E	G	P	E	A	V	W	A	R	H	A	L	T	A	K	A	M	R	A	G	V	T	A	M	.	.	.	G	L	S	V	W	A	A	S	D	S	I	A
Template Known Secondary structure			S	S	T	T		S	G	G	G	T	T	T	T	S	T	T	S			S	S																																												.	.	.	T			B	S	S	S	S	G	G	G	B
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.
			399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																									.																									.	.
Query SS confidence		.																									.																									.	.
Query Sequence		.	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	.	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A
Query Conservation		.																									.																									.	.
Alig confidence		.																									.															.	.	.	.							.	.
Template Conservation																																										.	.	.	.
Template Sequence		S	P	T	T	T	A	V	R	T	P	D	G	V	D	E	K	A	L	R	Q	A	A	R	A	R	Y	G	V	V	F	S	S	G	R	G	E	T	L	G	K	.	.	.	.	L	T	R	I	G	H	M	G	P	T	A	Q	P	I	Y	A	I	A	A	L	T	A	L	G	G	A	M	N	A	A
Template Known Secondary structure			S	S								T	T																			B				G	G	G	T	T	T	.	.	.	.								G	G	G		S																		T
Template Predicted Secondary structure																																										.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.					.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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