Job Description P39389 Confidence 99.95% Date Thu Jan 5 12:00:20 GMT 2012 Rank 104 Aligned Residues 327 % Identity 15% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A
Query Conservation
Alig confidence										.	.																		.	.	.	.																								.	.	.	.	.	.	.
Template Conservation										.	.																		.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		P	L	L	V	G	R	P	N	.	.	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	.	.	.	.	Q	W	L	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	G	V	.	.	.	.	.	.	.	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A	H	A
Template Known Secondary structure					T	T				.	.																		.	.	.	.	T			S	S	S																T	S	.	.	.	.	.	.	.	S						S
Template Predicted Secondary structure										.	.																		.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		2020	.	.	.	.	.	.	.			.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.					.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.								.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	.	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V
Query Conservation																																									.
Alig confidence			.																																						.											.	.	.											.	.									.	.	.
Template Conservation			.																																																	.	.	.											.	.									.	.	.
Template Sequence		A	.	G	L	T	G	E	V	I	M	P	S	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	.	.	.	T	P	R	T	S	A	V	V	G	V	.	.	H	L	W	G	R	P	C	A	.	.	.	A	D	Q	L
Template Known Secondary structure			.	T			S						S	S	S		T									T	T								B		T	T	T	S	S	B		S	T	T						.	.	.		T	T								.	.		G	G	G					.	.	.
Template Predicted Secondary structure			.																																																	.	.	.											.	.									.	.	.
Template SS confidence
		2087		.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.				.	.	.	.	2140	.	.	.	.	.			.	.	.	.	2150	.	.	.				.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		R	K	V	A	D	E	H	G	L	R	L	Y	F	D	A	A	H	A	L	.	.	.	.	G	C	A	V	D	G	R	P	A	G	S	L	G	D	A	E	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H	N	F	G	F	D	L	P	G
Template Known Secondary structure									T								T	T		T	.	.	.	.	T				T	T			T	T	S	S	S	S	S							T	T	S	S	S			S	S							S												T	B	T	T	T	T		T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		2158	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.					.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.	.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.	.	.	.	.	2230	.	.	.
							339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.								400	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																														.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																														.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	.	.	.	.	.	.	.	F	L	L	W	I	E	L
Query Conservation		.	.	.	.	.																																																														.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.	.	.	.	.																							.	.												.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																							.	.
Template Sequence		G	S	P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	.	.	.	.	.	.	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	.	.	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E
Template Known Secondary structure				T	T				B		B																.	.	.	.	.	.																			T		S		.	.	T	T						G	G	G	G	S	B
Template Predicted Secondary structure																											.	.	.	.	.	.																							.	.
Template SS confidence
		2234	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.							.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280			.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.
		407	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.																		.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		P	E	.	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence				.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R
Template Known Secondary structure					S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2306	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.
		468
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		2386

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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