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Job DescriptionP39389
Confidence99.73%DateThu Jan 5 12:00:20 GMT 2012
Rank222Aligned Residues370
% Identity12%Templatec2jisA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp.
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  PVEITQWDQVLDMLEAHSDSSIVPLSKSTPDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGS
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Template Sequence  RSQGESQKQILERCRAVIRYSVKTGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVG
Template Known Secondary structure 
SS


S

TTSTTSSS







TT
TTT
T
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   61........70.........80.........90.........100.........110.........120.........130.........140
 
   165....170.........180.........190 .........200.........210.... .....220.......
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Query Sequence  VVTADDIIITSGCHNSMSLALMAVCK. . . . . . . . . . . . . . PGDIVAVESPCYYGSMQMLRGMGV. . . KVIEIPTDPETGI
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Template Sequence  W. SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKM
Template Known Secondary structure 
.SS
SS
TT
GGGS

TTS
TTTS
GGG
B
TTS
B
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   141 ........150.........160.........170.........180.........190.........200.........210.........
 
   228.230......... 240.........250.........260.........270.........280.........290.........300...
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Query Sequence  SVEALELALEQW. . . . PIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDG
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Template Sequence  VPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP. . . LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRA
Template Known Secondary structure 
TT
BS
TTT

B

...T
TTGGGGGG
TTTGGGGTTGGG
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   220.........230.........240.........250..... ....260.........270.........280.........290......
 
   304.....310.........320.........330......... 340.........350.........360.........
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Query Sequence  RVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYA. . . . . . . . . . . . . . ISSFNVPSTQMAAATFVLEGHYHRHIRRMR
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Template Sequence  DSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGD. . . . QGLERRI
Template Known Secondary structure  S
TTSTT


S

S

S




S
GGG

GGG
S
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   297..300.........310.........320.........330.........340.........350.........360..... ....370..
 
   370.........380.........390.........400........ .410.........420.........430...
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Query Sequence  QIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPE. . . . . . . . . . . . . . . . QVDMVCVARQLCRMKIQVAAGSIFS
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Template Sequence  DQAFVLARYLVEEMKKR. . EGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPH.
Template Known Secondary structure  TS..TTSS

SSS

GGGTT
TTSTTTTS
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   382.......390........ .400.........410.........420.........430.........440.........450........
 
   434.....440....... ..450.........460.......
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Query Sequence  ASGKYRNCLRINCA. . LPLSETYREALKQIGEAVYR
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Template Sequence  . . GTRGNFFRVVVANSALTCADMDFLLNELERLGQD
Template Known Secondary structure  ..TT


TT

TT
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   459460.........470.........480.........490..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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