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Job DescriptionP39389
Confidence99.95%DateThu Jan 5 12:00:20 GMT 2012
Rank99Aligned Residues394
% Identity16%Templatec2hzpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:kynureninase; PDBTitle: crystal structure of homo sapiens kynureninase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25.... 30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  KLPSV. . RSLSQEHGVSISTVQQAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHS
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Template Sequence  ELPADTVQRIAAELKCHPTDERVALHLDEEDKLRHFRE. . . FYIPKIQDLPPV. . . . . . . . . . . . . . . . . . . . DLSLVNK
Template Known Secondary structure 

TS
TTS
TTGGGG
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B

BGGGSTT
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GGGS
T
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   7..10.........20.........30.........40.... .....50...... ...60...
 
   103......110.........120.........130.........140...... ...150.........160.........170.........
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Query Sequence  DSSIVPLSKSTPDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLA. . . GQRVLREQIARLMLDSGSVVTADDIIITSGCHN
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Template Sequence  DENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVG. . . . . ANEKEIALMNALTV
Template Known Secondary structure  T
B

BTTTS

B
TTGGGGGTSSSS
GGGTTTTTGGGGT.....

GGG
S
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   65....70.........80.........90.........100.........110.........120..... ....130.........
 
   180.........190. ........200.........210.. .......220.........230........ .240......
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Query Sequence  SMSLALMAVCKP. . . GDIVAVESPCYYGSMQMLRGM. . . . . . . . . GVKVIEIPTDPETGISVEALELALEQ. WPIKGIIL
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Template Sequence  NLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVIL
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SSS
TT

TT




TT
SS

GGG
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   140.........150.........160.........170.........180.........190.........200.........210.........
 
   247..250.........260.........270.........280.........290.........300.........310..... ....320....
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Query Sequence  VPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSI. . APGLRVGWV
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Template Sequence  FSGVHFYTGQHFN. . . IPAITKAGQAKGCYVGFDLAHAVGNVELY. . . . . . . LHDWGVDFACWCSYKYLNAGAGGIAGAF
Template Known Secondary structure  SB
TTT
BB

...TT

TTTTTTS


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SSSTT


TT


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   220.........230.. .......240.........250.........260. ........270.........280.........
 
   325....330... ......340.........350.........360.........370.........380
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Query Sequence  APGRYHDKL. . . . . . . . . . . . . . . . . . . . . . . . MHMKYAISSFNVPSTQMAAATFVLEGHYHRHIRRMRQIYQRNLALYT
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Template Conservation 
       
 
   
  
                        

       

 
 
  
   
   
      
   
 
Template Sequence  IHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLE
Template Known Secondary structure 
GGGTTTS

SS

GGGB
TT

S


B
SSGGGG

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   290.........300.........310.........320.........330.........340.........350.........360.........
 
   381........390........ .400.........410.........420.........430.........440....... ..450....
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Query Sequence  CWIREYFPCEICITRPKG. . . . GFLLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSASGKYRNCLRINCA. . LPLSETY
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Template Sequence  YLIKHNYGKVVNIITPSHVEERGCQLTITFSV. . PNKDVFQELEKRGVVC. . . . . . . . DKRNPNGIRVAPVPLYNSFHDV
Template Known Secondary structure 




S
SSGGGB
S


..TT

TTT
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   370.........380.........390.........400. ........410....... ..420.........430.........
 
   455....460......
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Query Sequence  REALKQIGEAVY
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Template Sequence  YKFTNLLTSILD
Template Known Secondary structure  T
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   448.450.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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