Job Description P39389 Confidence 99.90% Date Thu Jan 5 12:00:20 GMT 2012 Rank 155 Aligned Residues 319 % Identity 13% Template c2gqnB_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine beta-lyase; PDBTitle: cystathionine beta-lyase (cbl) from escherichia coli in complex with2 n-hydrazinocarbonylmethyl-2-nitro-benzamide Resolution 1.80 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V
Query Conservation
Alig confidence																															.														.	.	.	.	.	.	.
Template Conservation																															.														.	.	.	.	.	.	.
Template Sequence		V	F	D	S	V	E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	.	H	F	S	L	Q	Q	A	M	C	E	L	E	G	.	.	.	.	.	.	.	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M
Template Known Secondary structure				S	S										T	T	T	T	T	S			B	G	G	G					.													T	.	.	.	.	.	.	.		S						S	S															T	T
Template Predicted Secondary structure																															.														.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		198	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		E	S	P	C	Y	Y	G	S	.	.	.	.	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																		.	.	.	.	.																							.	.																		.
Template Conservation																															.	.	.	.	.																							.	.																		.
Template Sequence		T	N	T	A	Y	E	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	L	.	.	.	.	.	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	.	.	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	.	S	V	V	P
Template Known Secondary structure			T	T	S											T	G	G	G	G	T								T	T	.	.	.	.	.		G	G	G	G	G	G	G			T	T								S	S		.	.	T	T	T															.				T
Template Predicted Secondary structure																															.	.	.	.	.																							.	.																		.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A
Query Conservation																																																				.
Alig confidence																						.	.	.	.	.	.																									.
Template Conservation																						.	.	.	.	.	.
Template Sequence		D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	A	L	D	.	.	.	.	.	.	F	G	I	D	V	S	I	Q	A	A	T	K	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T
Template Known Secondary structure		T								T	T	T	T	T	T	S	S		G	G	G	.	.	.	.	.	.	G	T		S						T	T	T	T	T	T		S	S	S																							T	T
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.																		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.																							.	.
Template Sequence		S	R	G	L	R	T	.	.	.	.	.	.	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	.	.	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	K	L	N	N	E	E	L
Template Known Secondary structure						T	T	.	.	.	.	.	.																							.	.	T	T							T	T	S	T	T	S	T	T									S				S							S	S
Template Predicted Secondary structure								.	.	.	.	.	.																							.	.
Template SS confidence
		253	.	.	.	.	.							.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		416	.	.	.	420	.				.	.	.	.	.	.	.	.	430	.	.	.	.																		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	Q	L	C	R	.	.	.	M	K	I	Q	V	A	A	G	S	I	F	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M
Query Conservation								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																																													.	.	.
Template Sequence		A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	E	D	V	D	D	L	.	.	.	I	A	D	L	D	A	G	F	A	R	I	V
Template Known Secondary structure						T	T		S	S					S				S	S	S													T	T		T	T	S						S									S	S						.	.	.											T
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.				.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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