Job Description P39389 Confidence 99.91% Date Thu Jan 5 12:00:20 GMT 2012 Rank 141 Aligned Residues 298 % Identity 12% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	.	.	.	.	.	.	.	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																												.	.																						.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																												.	.
Template Sequence		L	L	H	V	S	N	L	Y	E	N	P	W	Q	E	E	L	A	H	K	L	V	K	H	F	W	T	.	.	E	G	K	V	F	F	A	N	S	G	T	E	S	V	E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	T	Y	G	S	L	S	A
Template Known Secondary structure			S				T	T	S															T	S	S	S	.	.								S	S																			T	T										B	T					S	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
						209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure		.	.	.	.																																																.
Query SS confidence		.	.	.	.																																																.
Query Sequence		.	.	.	.	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	.	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y
Query Conservation		.	.	.	.																																																.
Alig confidence		.	.	.	.																																										.	.					.
Template Conservation																																															.	.
Template Sequence		T	G	Q	P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A	K	L	N	D	I	D	S	V	Y	K	L	L	D	E	E	T	A	G	I	I	I	E	V	I	Q	.	.	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D	E	V	Q
Template Known Secondary structure			B		G	G	G	T	T	T	T		S			S	S						T	T							T	T			T	T								S			.	.	T	T	T	T	S																			T								T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H
Query Conservation																																										.
Alig confidence										.	.	.	.																													.																																			.	.	.	.	.
Template Conservation										.	.	.	.																																																																.	.	.	.	.
Template Sequence		T	G	I	G	R	T	G	E	.	.	.	.	F	Y	A	Y	Q	H	F	N	L	K	P	D	V	I	A	L	A	K	G	L	G	G	G	V	P	I	G	A	I	L	A	R	E	E	V	A	Q	S	F	T	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	R	A	G	T	V	V	V	D	.	.	.	.	.
Template Known Secondary structure		T	T	T	T	T	T	S	S	.	.	.	.	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S													T	T			T	T	S				S	S	T	T														.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.																																																																.	.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L
Query Conservation
Alig confidence		.																											.	.	.	.																.	.																					.	.	.	.	.	.	.	.
Template Conservation		.																											.	.	.	.																.	.																					.	.	.	.	.	.	.	.
Template Sequence		.	E	V	E	K	L	L	P	H	V	R	E	V	G	N	Y	F	K	E	K	L	K	E	L	G	K	G	.	.	.	.	K	V	K	G	R	G	L	M	L	G	L	E	L	E	R	.	.	E	C	K	D	Y	V	L	K	A	L	E	K	G	L	L	I	N	C	T	A	.	.	.	.	.	.	.	.	G	K	V	L
Template Known Secondary structure		.																							T	T	S	S	.	.	.	.						T	T							S	S	.	.												T	T							T	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure		.																											.	.	.	.																.	.																					.	.	.	.	.	.	.	.
Template SS confidence
			287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.					.	.	.	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.									.	.	350	.
		443	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		R	F	L	P	P	L	I	I	Q	K	E	H	I	D	R	A	I	S	V	L	R	E	I	L
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions