Job Description P39389 Confidence 99.84% Date Thu Jan 5 12:00:20 GMT 2012 Rank 182 Aligned Residues 320 % Identity 17% Template c2cb1A_ PDB info PDB header:lyase Chain: A: PDB Molecule:o-acetyl homoserine sulfhydrylase; PDBTitle: crystal structure of o-actetyl homoserine sulfhydrylase2 from thermus thermophilus hb8,oah2. Resolution 2.0 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A
Query Conservation
Alig confidence																																									.														.	.	.	.	.	.	.
Template Conservation																																									.														.	.	.	.	.	.	.
Template Sequence		A	V	G	L	P	I	Y	A	V	A	A	Y	G	F	K	T	L	E	E	G	Q	E	R	F	A	T	G	E	G	Y	V	Y	A	R	Q	K	D	P	T	.	A	K	A	L	E	E	R	L	K	A	L	E	G	.	.	.	.	.	.	.	A	L	E	A	V	V	L	A	S	G	Q	A	A	T	F	A	A	L	L	A
Template Known Secondary structure			S	S							S	B				S	S													S		S	B	T	T	T					.													T	.	.	.	.	.	.	.		S						S	S											T
Template Predicted Secondary structure																																									.														.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70								.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	.	.	.	.	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.										.	.	.	.	.	.																								.	.									.	.	.
Template Conservation																																							.	.	.	.	.	.																								.	.									.	.	.
Template Sequence		L	L	R	P	G	D	E	V	V	A	A	K	G	L	F	G	Q	T	I	G	L	F	G	Q	V	L	S	L	M	G	V	T	V	R	Y	V	D	.	.	.	.	.	.	P	E	P	E	A	V	R	E	A	L	S	A	K	T	R	A	V	F	V	E	T	V	A	.	.	N	P	A	L	L	V	P	D	.	.	.	L
Template Known Secondary structure		T			T	T							T	T												T	T	T	T	T	T								.	.	.	.	.	.	S	S										T	T								S	S		.	.	T	T	T						.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.																								.	.									.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.				.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.																		.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		E	A	L	A	T	L	A	E	E	A	G	V	A	L	V	V	D	N	T	F	G	A	A	G	A	L	C	R	P	.	.	.	.	.	.	.	L	A	W	G	A	H	V	V	V	E	S	L	T	W	A	S	G	H	G	S	V	L	G	G	A	V	L	S	R	E	T	E	L	W	R	N	Y	P	Q	F	L	Q	P	W
Template Known Secondary structure												T								G	G	G	T	T	T	T	S			G	.	.	.	.	.	.	.	G	G	G	T		S										S		S	S													S	G	G	G	G	S	G	G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
										329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																				.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																																																				.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																																																																				.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																															.	.	.	.	.	.																																.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.
Template Sequence		E	A	L	R	A	R	C	F	P	E	R	V	R	T	L	G	L	S	L	C	G	M	A	L	S	P	F	N	A	Y	L	L	F	Q	G	L	E	T	.	.	.	.	.	.	V	A	L	R	V	A	R	M	S	E	T	A	R	F	L	A	E	R	L	Q	G	H	P	K	V	K	A	L	R	Y	P	G	L	P	E	D
Template Known Secondary structure					G	G	G											T	T	T	T																G	G	G	.	.	.	.	.	.																					T		T	T		S					T	T	S	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.							.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
												396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.																				.	.	440	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	N	C	L	R	I	N	C
Query Conservation		.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.
Template Sequence		P	A	H	R	N	A	R	K	Y	L	A	S	G	G	P	I	L	T	L	D	L	G	D	L	E	R	A	S	R	F	L	G	A	I	R	L	L	K	.	A	A	N	L	G	D	A	R	T	L	L	V	H	P	W	T	T	T	H	S	R	L	K	E	E	A	R	L	Q	A	G	V	T	P	G	L	V	R	V	S	V
Template Known Secondary structure		T	T									S	S	S		S							S	S												S	S			.		S			S		S	S						T	T	T	T	T	T	T	T	S								T	T			T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	P	L	S	E	T	Y	R	E	A	L	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	E	D	P	L	D	L	L	A	L	F	E	E
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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