Return to main results Retrieve Phyre Job Id

Job DescriptionP30847
Confidence99.97%DateThu Jan 5 11:46:30 GMT 2012
Rank10Aligned Residues146
% Identity32%Templated2c2aa2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Histidine kinase
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   307..310.........320.........330.........340 .........350.........360.........370... ......380.
Predicted Secondary structure 









..














...
Query SS confidence 

































. .
































. . .







Query Sequence  AYQKAPVDLIPLLEVAGGAFRERFASRGLKLQFS. . LPDSITVFGDRDRLMQLFNNLLENSLRYTDSGG. . . SLQISAGQ
Query Conservation                              
     ..         
   
  

 


 

 
      ... 
 
    
Alig confidence 

































..
































...







Template Conservation   
      
  
                
 
              
   
  

 


 


           
 
    
Template Sequence  QINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDE
Template Known Secondary structure 



TT
SS
S


T

TT
TT
Template Predicted Secondary structure 






















Template SS confidence 















































































   321........330.........340.........350.........360.........370.........380.........390.........400
 
   382.......390.........400.........410.........420.........430.........440.........450.........460.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  RDKTVRLTFADSAPGVSDDQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVELPLER
Query Conservation        
 
 
 
 

       

  
 
          
 



 

  

   

 
   
    

 
 
 

   
Alig confidence 






























.........







































Template Conservation          
 
 
 
        

      .........  



 
   
    

 
   
    

 
 
 

  
Template Sequence  KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRV. . . . . . . . . DTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKDR
Template Known Secondary structure  TT
SS


GGGTTGGGSTT


.........



TTT
TTT


Template Predicted Secondary structure 


















.........











Template SS confidence 















































































   401........410.........420.........430. ........440.........450.........460.........470.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions