 |
Job Description | P30847 | Confidence | 30.60% | Date | Thu Jan 5 11:46:30 GMT 2012 |
Rank | 104 | Aligned Residues | 69 |
% Identity | 12% | Template | c3t6oA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:sulfate transporter/antisigma-factor antagonist stas; |
PDBTitle: the structure of an anti-sigma-factor antagonist (stas) domain protein2 from planctomyces limnophilus.
|
Resolution | 2.10 Å |
|
 |
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
|
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | A | G | Q | R | D | K | T | V | R | L | T | F | A | D | S | A | P | G | V | S | D | D | Q | L | Q | K | L | F | E | R | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | R | T | E | G | S | R | N | R | A | S | G | G | S | G | L | G | . |
. |
L | A | I | C | L | N | I | V | E | A | H | N | G | R | I | I | A |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
| . | . |
|   |
|
|   |   |
|
|   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
Template Sequence |   |
I | R | V | T | H | E | A | Q | V | T | V | I | S | F | P | A | V | F | Q | R | L | R | E | T | E | V | E | Q | I | A | S | T | F | L | A | A | X | Q | G | A | Q | P | R | K | V | L | I | D | L | E | G | V | E | F | F | G | S | S | F | I | E | L | L | V | R | G | W | K | R | I | K | E | D | Q | Q | G | V | F | A | L |
Template Known Secondary structure |   |
|  |  |  |  |  | T | T |  |  |  |  |  |
|
| G | G | G | S |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S | S |
|  |  |  |  |  |
| T | T |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
444 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
A | H |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
C | S |
Template Known Secondary structure |   |
 | S |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
84 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|