Job Description P30847 Confidence 99.94% Date Thu Jan 5 11:46:30 GMT 2012 Rank 19 Aligned Residues 154 % Identity 26% Template c3jz3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:sensor protein qsec; PDBTitle: structure of the cytoplasmic segment of histidine kinase qsec Resolution 2.50 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340		.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		K	F	T	P	E	T	V	A	S	L	Q	A	E	V	G	T	L	T	K	L	V	D	D	L	H	Q	L	S	M	S	D	E	G	A	L	A	Y	Q	K	A	P	V	D	L	I	P	L	L	E	V	A	G	G	A	F	R	E	R	F	A	S	R	G	L	K	L	Q	F	S	.	L	P	D	S	I	T	V	F	G	D
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		S	D	D	D	P	Q	L	L	Q	L	H	S	G	I	D	R	A	T	R	L	V	D	Q	L	L	T	L	S	R	L	D	S	L	D	N	L	Q	D	V	A	E	I	P	L	E	D	L	L	Q	S	S	V	X	D	I	Y	H	T	A	Q	Q	A	K	I	D	V	R	L	T	L	N	A	H	S	I	K	R	T	G	Q
Template Known Secondary structure																													T	T				S	T	T		T	T																								T	T								S			S
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	R	L	M	Q	L	F	N	N	L	L	E	N	S	L	R	Y	T	D	S	G	G	S	L	Q	I	S	A	G	Q	R	D	K	T	V	R	L	T	F	A	D	S	A	P	G	V	S	D	D	Q	L	Q	K	L	F	E	R	F	Y	R	T	E	G	S	R	N	R	A	S	G	G	S	G	L	G	L	A	I	C
Query Conservation
Alig confidence																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	L	L	S	L	L	V	R	N	L	L	D	N	A	V	R	Y	S	P	Q	G	S	V	V	D	V	T	L	N	A	D	N	.	.	.	.	F	I	V	R	D	N	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	I	V
Template Known Secondary structure																			S			T	T									S	S		.	.	.	.						S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.					.	.	.	.	.	.	.	390	.																														.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	I	V	E	A	H	N	G	R	I	I	A	A	H	S	P	F	G	G	V	S	I	T	V	E	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	I	A	K	L	H	G	X	N	V	E	F	G	N	A	E	Q	G	G	F	E	A	K	V	S	W	L
Template Known Secondary structure								T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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