Job Description P30847 Confidence 99.65% Date Thu Jan 5 11:46:30 GMT 2012 Rank 27 Aligned Residues 109 % Identity 17% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.				.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.											.
Query SS confidence																						.	.	.											.
Query Sequence		L	M	Q	L	F	N	N	L	L	E	N	S	L	R	Y	T	D	S	G	G	.	.	.	S	L	Q	I	S	A	G	Q	R	D	.	K	T	V	R	L	T	F	A	D	S	A	P	G	V	S	D	D	Q	L	Q	K	L	F	E	R	F	Y	R	T	E	G	S	R	N	R	A	S	G	G	S	G	L	G	L	A	I
Query Conservation																						.	.	.											.
Alig confidence																						.	.	.											.																																					.
Template Conservation																																																																								.
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	.	G	Q	Q	G	I	G	I	S	A
Template Known Secondary structure																		T	T	T	S		S											T	T	T										S					G	G	G						S													.	S	S	S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.
		430	.	.	.	.	.	.	.	.	.	440		.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure													.							.
Query SS confidence													.							.
Query Sequence		C	L	N	I	V	E	A	H	N	G	R	.	I	I	A	A	H	S	.	P	F	G	G	V	S	I	T	V	E	L	P	L	E	R	D	L
Query Conservation													.							.
Alig confidence													.							.
Template Conservation
Template Sequence		A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I	N	T	S	T
Template Known Secondary structure										T											S	S	S	S											S	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions