Job Description P30847 Confidence 98.18% Date Thu Jan 5 11:46:30 GMT 2012 Rank 48 Aligned Residues 99 % Identity 11% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

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		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.				.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400									.	.	.	.	.	.	.	.	.	410	.	.	.	.					.	.	.	.
Predicted Secondary structure																					.	.	.																													.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																					.	.	.																													.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		L	M	Q	L	F	N	N	L	L	E	N	S	L	R	Y	T	D	S	G	.	.	.	G	S	L	Q	I	S	A	G	Q	R	D	K	T	V	R	L	T	F	A	D	S	A	P	G	V	S	D	D	.	.	.	.	.	.	.	.	Q	L	Q	K	L	F	E	R	F	Y	R	T	E	G	.	.	.	.	S	R	N	R
Query Conservation																					.	.	.																													.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence																					.	.	.													.	.															.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																																				.	.
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	.	.	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E	K	K	V
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T	.	.								S	S					S			T	T	T	T										S	S	S			S				G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	G	S	G	L	G	L	A	I	C	L	N	I	V	E	A	H	N	G	R	I	I	A	A	H	S	P	F	G	G	V	S	I	T	V	E	L
Query Conservation
Alig confidence																					.	.										.
Template Conservation																					.	.										.
Template Sequence		T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	K	F	.	.	T	V	E	T	A	S	R	E	Y	.	K	K	M	F	K	Q	T	W
Template Known Secondary structure			S			S	S									T					.	.							G	G	G	.	T
Template Predicted Secondary structure																					.	.										.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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