Return to main results Retrieve Phyre Job Id

Job DescriptionP30847
Confidence98.10%DateThu Jan 5 11:46:30 GMT 2012
Rank51Aligned Residues98
% Identity13%Templatec1s16B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:topoisomerase iv subunit b; PDBTitle: crystal structure of e. coli topoisomerase iv pare 43kda subunit2 complexed with adpnp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   354.....360.........370.........380.........390.........400. ........410.. .......420.
Predicted Secondary structure 












........




....








Query SS confidence 















































. . . . . . . .










. . . .








Query Sequence  LMQLFNNLLENSLRYTDSGGSLQISAGQRDKTVRLTFADSAPGVSDDQ. . . . . . . . LQKLFERFYRT. . . . EGSRNRASG
Query Conservation 
  

 


 

 
       
 
          
 
 
 
 

    ........   

  
 
 ....         
Alig confidence 































.














........










....








Template Conservation 
  





 



      
  
 
 
   
. 
 
 


 


            
       
           
 
Template Sequence  PNHLGQEVIDNSVDEALAGHAKRVDVILHADQ. SLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSNKNYQFSGG
Template Known Secondary structure  TTT

S
TTS.

SS



SB
TTT
SB
TT
SS
SSSSS
SS
S
Template Predicted Secondary structure 






.

































Template SS confidence 















































































   2032.......2040.........2050.........2060... ......2070.........2080.........2090.........2100.........2110
 
   422.......430.........440.........450.......
Predicted Secondary structure 









Query SS confidence 



































Query Sequence  GSGLGLAICLNIVEAHNGRIIAAHSPFGGVSITVEL
Query Conservation 
 



 

  

   

 
   
    

 
 
 
Alig confidence 











.....


















Template Conservation    
 

  
 
 .....
    
     
       
Template Sequence  LHGVGISVVNAL. . . . . SKRVEVNVRRDGQVYNIAF
Template Known Secondary structure 
SS
T.....TT
Template Predicted Secondary structure 


.....

Template SS confidence 



































   2111........2120.. .......2130.........2140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions