Job Description P30847 Confidence 98.21% Date Thu Jan 5 11:46:30 GMT 2012 Rank 47 Aligned Residues 83 % Identity 19% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.													.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	R	D	R	L	M	Q	L	F	N	N	L	L	E	N	S	L	R	Y	T	D	S	G	G	S	L	Q	I	S	A	G	Q	R	D	K	T	V	R	L	T	F	A	D	S	A	P	G	V	S	D	D	Q	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	K	L	F	E	R	F	Y	R	T	E	G	S	R	N
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		G	V	E	G	Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	.	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S	G	G	K	F	E	Q	G	A	Y	K
Template Known Secondary structure		S																					T	T	S										T	T	S		.						S	S						S			T	T	T	T										S	S				S	G	G	G	S	S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	S	G	G	S	G	L	G	L	A	I	C	L	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	G	G	L	H	G	V	G	A	S	V	V	N	A	L
Template Known Secondary structure				S		S	S	T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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