Job Description P16432 Confidence 99.77% Date Thu Jan 5 11:35:08 GMT 2012 Rank 3 Aligned Residues 144 % Identity 22% Template c1kqfB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:formate dehydrogenase, nitrate-inducible, iron-sulfur PDBTitle: formate dehydrogenase n from e. coli Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																											.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	K	T	G	T	A	T	S	S	Y	P	L	E	P	I	A	V	D	K	N	F	R	G	K	P	E	Q	N	P	Q	Q	C	I	G	C	A	A	C	V	N	A	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	A	L	T	V	E	T	D	L	A
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		I	K	R	S	A	T	N	S	I	T	P	P	.	S	Q	V	R	D	Y	K	A	E	V	A	K	L	I	D	V	S	T	C	I	G	C	K	A	C	Q	V	A	C	S	E	W	N	D	I	R	D	E	V	G	H	C	V	G	V	Y	D	N	P	A	D	L	S	A	K	S	W	T	V	M	R	F	S	E	T	E	Q
Template Known Secondary structure					T	T			T	T	S			.			S													T	T	T																T									S	S	S	S			S	S	S		B	T	T	B	S										T
Template Predicted Secondary structure														.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		T	G	E	L	A	W	E	F	N	L	G	H	C	I	F	C	G	R	.	.	C	E	E	V	C	P	T	A	A	I	K	L	S	Q	E	Y	E	L	A	V	W	K	K	E	D	F	L	Q	Q	S	R	F	A	L	C	N	C	R	V	C	N	R	P	F	A	V	Q	K	E	I	D	Y	A	I	A	L	L	K	H	N
Query Conservation																				.	.
Alig confidence																				.	.													.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	K	L	E	W	L	I	R	K	D	G	C	M	H	C	E	D	P	G	C	L	K	A	C	P	S	A	G	A	I	I	.	.	.	.	.	.	.	.	Q	Y	A	N	G	I	V	D	F	Q	S	E	N	C	I	G	C	G	Y	C	I	A	G	C	P	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	S									S				B	S	S									S	T	T	S			.	.	.	.	.	.	.	.			T	T	S						G	G	G												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		G	D	S	R	A	E	N	H	R	E	S	F	E	T	C	P	E	C	K	.	.	.	.	.	.	.	.	.	R	Q	K	C	L	V	P	S	D	R	I	E	L	T	R	H
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	I	P	R	L	N	K	E	D	N	R	V	Y	K	C	T	L	C	V	D	R	V	S	V	G	Q	E	P	A	C	V	K	T	C	P	T	G	A	I	H	F	G	T	K
Template Known Secondary structure		.						T	T	T	T							T	T					T	T	T										T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions