Email l.a.kelley@imperial.ac.uk Description P24251 Date Thu Jan 5 11:41:37 GMT 2012 Unique Job ID b7a85e0f3efeed58

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3rpjA_ 100.0 48 PDB header:transcription regulator Chain: A: PDB Molecule:curlin genes transcriptional regulator; PDBTitle: structure of a curlin genes transcriptional regulator protein from2 proteus mirabilis hi4320. 2 d2bhua1 67.4 20 Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:E-set domains of sugar-utilizing enzymes 3 c2b9bA_ 62.2 44 PDB header:viral protein Chain: A: PDB Molecule:fusion glycoprotein f0; PDBTitle: structure of the parainfluenza virus 5 f protein in its metastable,2 pre-fusion conformation 4 d2a1va1 49.9 18 Fold:Secretion chaperone-like Superfamily:YjbR-like Family:YjbR-like 5 d3duea1 45.9 23 Fold:BLIP-like Superfamily:BT0923-like Family:BT0923-like 6 d2fkia1 32.8 22 Fold:Secretion chaperone-like Superfamily:YjbR-like Family:YjbR-like 7 c3nrlB_ 22.2 25 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein rumgna_01417; PDBTitle: crystal structure of protein rumgna_01417 from ruminococcus gnavus,2 northeast structural genomics consortium target ugr76 8 d1axib1 18.0 28 Fold:Immunoglobulin-like beta-sandwich Superfamily:Fibronectin type III Family:Fibronectin type III 9 d3elga1 17.7 15 Fold:BLIP-like Superfamily:BT0923-like Family:BT0923-like 10 c1agqB_ 16.4 31 PDB header:growth factor Chain: B: PDB Molecule:glial cell-derived neurotrophic factor; PDBTitle: glial cell-derived neurotrophic factor from rat 11 d1b63a1 16.0 21 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:DNA gyrase/MutL, second domain 12 d2p02a2 15.1 35 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 13 d1mxaa2 14.3 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 14 d1qm4a2 13.0 30 Fold:S-adenosylmethionine synthetase Superfamily:S-adenosylmethionine synthetase Family:S-adenosylmethionine synthetase 15 c2gyrB_ 11.9 13 PDB header:hormone/growth factor Chain: B: PDB Molecule:neurotrophic factor artemin, isoform 3; PDBTitle: crystal structure of human artemin 16 d1zyma1 10.4 19 Fold:SAM domain-like Superfamily:Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain Family:Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain 17 c2w82C_ 9.7 28 PDB header:replication inhibitor Chain: C: PDB Molecule:orf18; PDBTitle: the structure of arda 18 c1lu0A_ 9.6 86 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:trypsin inhibitor i; PDBTitle: atomic resolution structure of squash trypsin inhibitor: unexpected2 metal coordination 19 d1lu0a_ 9.6 86 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 20 c3ctiA_ 9.6 86 PDB header:proteinase inhibitor (trypsin) Chain: A: PDB Molecule:trypsin inhibitor; PDBTitle: relaxation matrix refinement of the solution structure of2 squash trypsin inhibitor 21 c2ctiA_ not modelled 9.6 86 PDB header:proteinase inhibitor (trypsin) Chain: A: PDB Molecule:trypsin inhibitor; PDBTitle: determination of the complete three-dimensional structure2 of the trypsin inhibitor from squash seeds in aqueous3 solution by nuclear magnetic resonance and a combination4 of distance geometry and dynamical simulated annealing 22 c1ppeI_ not modelled 9.6 86 PDB header:hydrolase(serine proteinase) Chain: I: PDB Molecule:trypsin inhibitor cmti-i; PDBTitle: the refined 2.0 angstroms x-ray crystal structure of the2 complex formed between bovine beta-trypsin and cmti-i, a3 trypsin inhibitor from squash seeds (cucurbita maxima):4 topological similarity of the squash seed inhibitors with5 the carboxypeptidase a inhibitor from potatoes 23 c1ctiA_ not modelled 9.6 86 PDB header:proteinase inhibitor (trypsin) Chain: A: PDB Molecule:trypsin inhibitor; PDBTitle: determination of the complete three-dimensional structure2 of the trypsin inhibitor from squash seeds in aqueous3 solution by nuclear magnetic resonance and a combination4 of distance geometry and dynamical simulated annealing 24 c2staI_ not modelled 9.6 86 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:protein (trypsin inhibitor); PDBTitle: anionic salmon trypsin in complex with squash seed2 inhibitor (cucurbita maxima trypsin inhibitor i) 25 d2id1a1 not modelled 9.5 25 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:Iojap/YbeB-like 26 c1lu0B_ not modelled 9.5 86 PDB header:hydrolase inhibitor Chain: B: PDB Molecule:trypsin inhibitor i; PDBTitle: atomic resolution structure of squash trypsin inhibitor: unexpected2 metal coordination 27 c2v1vA_ not modelled 9.5 86 PDB header:hydrolase inhibitor Chain: A: PDB Molecule:trypsin inhibitor 1; PDBTitle: 3d structure of the m8l mutant of squash trypsin inhibitor2 cmti-i 28 c2a7oA_ not modelled 9.2 50 PDB header:transcription Chain: A: PDB Molecule:huntingtin interacting protein b; PDBTitle: solution structure of the hset2/hypb sri domain 29 d2c4ba2 not modelled 9.2 86 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 30 c2vpzG_ not modelled 9.2 50 PDB header:oxidoreductase Chain: G: PDB Molecule:hypothetical membrane spanning protein; PDBTitle: polysulfide reductase native structure 31 d1h9ii_ not modelled 9.1 60 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 32 d1h9hi_ not modelled 8.8 86 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 33 c1mcvI_ not modelled 8.8 86 PDB header:hydrolase Chain: I: PDB Molecule:hei-toe i; PDBTitle: crystal structure analysis of a hybrid squash inhibitor in2 complex with porcine pancreatic elastase 34 d1mcvi_ not modelled 8.8 86 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 35 c2it7A_ not modelled 8.7 86 PDB header:plant protein Chain: A: PDB Molecule:trypsin inhibitor 2; PDBTitle: solution structure of the squash trypsin inhibitor eeti-ii 36 d2it7a1 not modelled 8.7 86 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 37 c2letA_ not modelled 8.5 86 PDB header:proteinase inhibitor(trypsin) Chain: A: PDB Molecule:trypsin inhibitor ii; PDBTitle: an 1h nmr determination of the three dimensional structures2 of mirror image forms of a leu-5 variant of the trypsin3 inhibitor ecballium elaterium (eeti-ii) 38 d1rpya_ not modelled 8.1 19 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 39 c3m07A_ not modelled 8.0 11 PDB header:unknown function Chain: A: PDB Molecule:putative alpha amylase; PDBTitle: 1.4 angstrom resolution crystal structure of putative alpha2 amylase from salmonella typhimurium. 40 c3fg7A_ not modelled 7.6 16 PDB header:structural protein Chain: A: PDB Molecule:villin-1; PDBTitle: the crystal structure of villin domain 6 41 d1xa6a2 not modelled 7.6 18 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 42 d2evra2 not modelled 7.3 26 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:NlpC/P60 43 c1ik9C_ not modelled 7.3 38 PDB header:gene regulation/ligase Chain: C: PDB Molecule:dna ligase iv; PDBTitle: crystal structure of a xrcc4-dna ligase iv complex 44 d2o62a1 not modelled 7.2 23 Fold:Lipocalins Superfamily:Lipocalins Family:All1756-like 45 d2i1sa1 not modelled 6.9 27 Fold:MM3350-like Superfamily:MM3350-like Family:MM3350-like 46 d1exbe_ not modelled 6.6 21 Fold:POZ domain Superfamily:POZ domain Family:Tetramerization domain of potassium channels 47 d2btci_ not modelled 6.5 71 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 48 c2btcI_ not modelled 6.5 71 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:protein (trypsin inhibitor); PDBTitle: bovine trypsin in complex with squash seed inhibitor2 (cucurbita pepo trypsin inhibitor ii) 49 c2stbI_ not modelled 6.5 71 PDB header:hydrolase/hydrolase inhibitor Chain: I: PDB Molecule:protein (trypsin inhibitor); PDBTitle: anionic salmon trypsin in complex with squash seed2 inhibitor (cucurbita pepo trypsin inhibitor ii) 50 c3h9xB_ not modelled 6.3 13 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein pspto_3016; PDBTitle: crystal structure of the pspto_3016 protein from2 pseudomonas syringae, northeast structural genomics3 consortium target psr293 51 c2ysxA_ not modelled 6.2 15 PDB header:signaling protein Chain: A: PDB Molecule:signaling inositol polyphosphate phosphatase PDBTitle: solution structure of the human ship sh2 domain 52 c2yh5A_ not modelled 6.1 12 PDB header:lipid binding protein Chain: A: PDB Molecule:dapx protein; PDBTitle: structure of the c-terminal domain of bamc 53 c2xznZ_ not modelled 6.1 11 PDB header:ribosome Chain: Z: PDB Molecule:rps21e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 54 d1t6aa_ not modelled 6.0 12 Fold:TBP-like Superfamily:Rbstp2229 protein Family:Rbstp2229 protein 55 d2eyva1 not modelled 6.0 19 Fold:SH2-like Superfamily:SH2 domain Family:SH2 domain 56 d1eysl_ not modelled 5.9 67 Fold:Bacterial photosystem II reaction centre, L and M subunits Superfamily:Bacterial photosystem II reaction centre, L and M subunits Family:Bacterial photosystem II reaction centre, L and M subunits 57 c2kkuA_ not modelled 5.8 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of protein af2351 from archaeoglobus2 fulgidus. northeast structural genomics consortium target3 att9/ontario center for structural proteomics target af2351 58 d2bcqa3 not modelled 5.5 25 Fold:Nucleotidyltransferase Superfamily:Nucleotidyltransferase Family:DNA polymerase beta-like 59 c2nvgA_ not modelled 5.5 13 PDB header:oxidoreductase Chain: A: PDB Molecule:ubiquinol-cytochrome c reductase iron-sulfur subunit; PDBTitle: soluble domain of rieske iron sulfur protein. 60 c2qv5A_ not modelled 5.5 23 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2773; PDBTitle: crystal structure of uncharacterized protein atu2773 from2 agrobacterium tumefaciens c58 61 c3rv2B_ not modelled 5.4 43 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum