 |
Job Description | P0ACL7 | Confidence | 77.66% | Date | Thu Jan 5 11:18:28 GMT 2012 |
Rank | 247 | Aligned Residues | 50 |
% Identity | 22% | Template | d2dt5a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Transcriptional repressor Rex, N-terminal domain
|
Resolution | 2.16 |
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | R | V | R | A | L | I | D | E | K | N | L | E | A | G | M | K | L | P | A | E | R | Q | L | A | M | Q | L | G | V | S | R | N | S | L | R | E | A | L | A | K | L | V | S | E | G | V | L | L | S | R | R | G | G | G | T | F | I |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |   |   |
|   | . | . | . | . |   |   |
| . |
|
|   |
|
|
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |
| . | . | . | . |   |
|
|
|
|
|   |
|
Template Sequence |   |
L | R | I | L | E | E | L | E | A | Q | G | V | . |
. |
. |
. |
H | R | T | . |
S | S | E | Q | L | G | G | L | A | Q | V | T | A | F | Q | V | R | K | D | L | S | Y | F | G | S | Y | G | . |
. |
. |
. |
T | R | G | V | G | Y | T | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . |
|  |  | . |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| . | . | . | . |
| T | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
|
. | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
. | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|