Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACL7
Confidence68.46%DateThu Jan 5 11:18:28 GMT 2012
Rank285Aligned Residues98
% Identity12%Templated1r8da_
SCOP infoPutative DNA-binding domain Putative DNA-binding domain DNA-binding N-terminal domain of transcription activators
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
Predicted Secondary structure 















Query SS confidence 















































































Query Sequence  PAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEAS
Query Conservation 


 


   



  




  
   


    
 
  
                                        
Alig confidence 

















....

























































Template Conservation 
 
 


   


  


.... 

  


 
        


    
  
  
  
   
  
  
   
         
Template Sequence  YQVKQVAEISGVSIRTLH. . . . HYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKA
Template Known Secondary structure  B
S

....TTSS

S
TT

B
TT


TTS
Template Predicted Secondary structure 




....


























Template SS confidence 















































































   3......10.........20 .........30.........40.........50.........60.........70........
 
   112.......120.........130...
Predicted Secondary structure 

Query SS confidence 





















Query Sequence  TAWHAAMRATPGDKEKIQLCFE
Query Conservation                  
     
Alig confidence 





















Template Conservation          
      
      
Template Sequence  ALQSQKEILMKKKQRMDEMIQT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





















   7980.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions