Job Description P0ACL7 Confidence 94.21% Date Thu Jan 5 11:18:28 GMT 2012 Rank 130 Aligned Residues 91 % Identity 8% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.
Query SS confidence											.	.	.	.
Query Sequence		A	E	R	Q	L	A	M	Q	L	.	.	.	.	G	V	S	R	N	S	L	R	E	A	L	A	K	L	V	S	E	G	V	L	L	S	R	R	G	G	G	T	F	I	R	W	R	H	D	T	W	S	E	Q	N	I	V	Q	P	L	K	T	L	M	A	D	D	P	D	Y	S	F	D	I	L	E	A	R	Y	A	I
Query Conservation											.	.	.	.
Alig confidence											.	.	.	.																																														.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	.	.	.	.	.	.	.	.	.	K	N	F	I	N	K	V	Y	K	G	G	F	N
Template Known Secondary structure																																T	S							T	T							S	S											.	.	.	.	.	.	.	.	.								S	T	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	S	T	A	W	H	A	A	M	R	A	T	P	G	D	K	E	K	I	Q	L	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	V	L	N	F	V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions