 |
Job Description | P0ACL7 | Confidence | 83.18% | Date | Thu Jan 5 11:18:28 GMT 2012 |
Rank | 221 | Aligned Residues | 46 |
% Identity | 15% | Template | d1o57a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| N-terminal domain of Bacillus PurR
|
Resolution | 2.20 |
|
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | G | M | K | L | P | A | E | R | Q | L | A | M | Q | L | G | V | S | R | N | S | L | R | E | A | L | A | K | L | V | S | . |
. |
. |
. |
. |
. |
E | G | V | L | L | S | R | R | G | G | G | T | F | I | R |
Query Conservation |   |
  |
|
|   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|
|   |   |
|
|
|
|
|   |   |
|   |   | . | . | . | . | . | . |   |
|
|
|   |   |   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
| . |   |
|   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|
|
|   |
Template Sequence |   |
H | P | H | E | L | I | . |
P | L | T | F | F | S | E | R | Y | E | S | A | K | S | S | I | S | E | D | L | T | I | I | K | Q | T | F | E | Q | Q | G | I | G | T | L | L | T | V | P | G | A | A | G | G | V | K |
Template Known Secondary structure |   |
S | T | T |
|
| B | . |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |
| S | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|