Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACL7
Confidence95.58%DateThu Jan 5 11:18:28 GMT 2012
Rank74Aligned Residues40
% Identity20%Templated1ku9a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50.........60........
Predicted Secondary structure 















Query SS confidence 








































Query Sequence  GMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGG
Query Conservation 
  



 


   



  




  
   


    
 
Alig confidence 



.



































Template Conservation      .
  


  
 



 

  
  

  


 
     
Template Sequence  DKPL. TISDIXEELKISKGNVSXSLKKLEELGFVRKVWIKG
Template Known Secondary structure  SS
.T

TTS

TT
Template Predicted Secondary structure 



.








Template SS confidence 








































   3940.. .......50.........60.........70........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions