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Job Description | P0ACL7 | Confidence | 94.59% | Date | Thu Jan 5 11:18:28 GMT 2012 |
Rank | 114 | Aligned Residues | 94 |
% Identity | 18% | Template | c6paxA_ |
PDB info |
PDB header:gene regulation/dna | Chain: A: PDB Molecule:homeobox protein pax-6; |
PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions
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Resolution | 2.50 Å |
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2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
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Query Sequence |   |
I | V | L | P | R | R | L | S | D | E | V | A | D | R | V | R | A | L | I | D | E | K | N | L | E | A | G | M | K | L | P | A | E | R | Q | L | A | M | Q | L | G | V | S | R | N | S | L | R | E | A | L | A | K | L | V | S | E | G | V | L | L | S | R | R | G | G | G | T | F | I | R | W | R | H | D | T | W | S | E | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | V | N | G | R | P | L | P | D | S | T | R | Q | R | I | V | E | L | A | H | S | G | A | . |
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R | P | C | D | I | S | R | I | L | Q | V | S | N | G | C | V | S | K | I | L | G | R | Y | Y | A | T | G | S | I | R | P | R | A | I | G | G | S | K | P | R | V | A | T | P | E | V | V | S | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
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. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | I | V | Q | P | L | K | T | L | M | A | D | D | P | D | Y | S | F | D | I | L | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | A | Q | Y | K | Q | E | C | P | S | I | F | A | W | E | I | R | D | R | L | L | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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