Job Description P0ACL7 Confidence 84.09% Date Thu Jan 5 11:18:28 GMT 2012 Rank 216 Aligned Residues 44 % Identity 16% Template c3mkyP_ PDB info PDB header:dna binding protein/dna Chain: P: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form Resolution 2.86 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	R	L	S	D	E	V	A	D	R	V	R	A	L	I	D	E	K	N	L	E	A	G	M	K	L	P	A	E	R	Q	L	A	M	Q	L	G	V	S	R	N	S	L	R	E	A	L	A	K	L
Query Conservation
Alig confidence									.															.	.	.	.	.	.
Template Conservation									.															.	.	.	.	.	.
Template Sequence		P	T	S	A	Y	E	R	.	G	Q	R	Y	A	S	R	L	Q	N	E	F	A	G	.	.	.	.	.	.	N	I	S	A	L	A	D	A	E	N	I	S	R	K	I	I	T	R	C	I	N	T	A
Template Known Secondary structure									.										T	T	T	T	T	.	.	.	.	.	.										T	S
Template Predicted Secondary structure									.															.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions