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Job DescriptionP0ACL7
Confidence100.00%DateThu Jan 5 11:18:28 GMT 2012
Rank3Aligned Residues206
% Identity21%Templatec3fmsA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  LSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPL
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Template Sequence  VRTKVYNLLKEXILNHELKLGEKLN. VRELSEKLGISFTPVRDALLQLATEGLVKVVPRVGFFVTDVDEKFIRETIETRI
Template Known Secondary structure  TTSS
TT
B

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TSTTT



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   910.........20.........30... ......40.........50.........60.........70.........80.......
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  KTLMADDPDYSFDILEARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHNIVLLQTM
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Template Sequence  XXEVFCLENYFDK. . . . . . . . . . . . . . . . . IAGSEELLEIKGEIDDVAASAAREIFDDSDERLHKLFIRASGNELIISLY
Template Known Secondary structure  S.................T


TT

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   88.90.........100 .........110.........120.........130.........140.........150
 
   168.170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  RGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARH
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Template Sequence  EKIWDRIDLVRH. . . . . . . . LNERYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAETIKNLYTYERS
Template Known Secondary structure  T........T


TT
GGGSS

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   151........160.. .......170.........180.........190.........200.........210....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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