Job Description P0ACL7 Confidence 68.62% Date Thu Jan 5 11:18:28 GMT 2012 Rank 283 Aligned Residues 38 % Identity 24% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		19	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																							.	.	.	.
Query SS confidence											.	.																							.	.	.	.
Query Sequence		L	I	D	E	K	N	L	E	A	.	.	G	M	K	L	P	A	E	R	Q	L	A	M	Q	L	G	V	S	R	N	S	L	R	.	.	.	.	E	A	L	A	K	L	V	S
Query Conservation											.	.																							.	.	.	.
Alig confidence											.	.					.																		.	.	.	.
Template Conservation																	.
Template Sequence		M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	.	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L	K	Y
Template Known Secondary structure						T	T	S	S	T	T	S	S				.							T	T	S		S
Template Predicted Secondary structure																	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.		.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions