Job Description P60390 Confidence 51.71% Date Thu Jan 5 12:06:45 GMT 2012 Rank 395 Aligned Residues 88 % Identity 18% Template c3ps9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:trna 5-methylaminomethyl-2-thiouridine biosynthesis PDBTitle: crystal structure of mnmc from e. coli Resolution 2.54 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.												.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	.	.	.	.	.	.	.	.	.	.	.	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	D	P	R	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence										.																											.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		L	E	V	R	F	P	E	H	.	P	H	P	L	F	V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q
Template Known Secondary structure						G	G	G		.	S	S	S										T	T	S																		T	T	S	S											S	S												T	T		G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		48	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
																									72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	I	I	H	G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K	I	D	G	I	L	L	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																												.
Template Sequence		L	Q	A	Q	W	P	M	P	L	P	G	C	H	R	L	L	L	D	A	G	R	V	T	L	D	L	W	F	G	D	I	N	E	L	T	S	Q	L	D	D	S	L	.	N	Q	K	V	D	A	W	F	L	D
Template Known Secondary structure											S								G	G	G	T								S						G	G	G	B		G	G	G	.	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions