Job Description P60390 Confidence 97.97% Date Thu Jan 5 12:06:45 GMT 2012 Rank 215 Aligned Residues 89 % Identity 13% Template c3k0bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted n6-adenine-specific dna methylase; PDBTitle: crystal structure of a predicted n6-adenine-specific dna methylase2 from listeria monocytogenes str. 4b f2365 Resolution 1.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																																						.	.	.	.	50	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	V	L	L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	E	G	R	L
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	X	A	A	A	L	V	L	L	T	S	W	H	P	D	R	P	F	Y	D	P	V	C	G	S	G	T	I	P	I	E	A	A	L	I	G	Q	N	I	A	P	G	F	N	R	E	F	V	S	E	T	W	D	W	X	P	K	Q	V	W	A	D	A	R	Q	E	A	E	D	L	A	N	Y	D	Q	P	L	N	I
Template Known Secondary structure												S				T	T	S					T	T		T	T	S											T	T			T	T	T	T	S			G	G	G	G		T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	.	.	.	.	.	D	P	R	F	S	I	I	H	G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K	I	D	G	I	L	L	D	L	G	V
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		I	G	G	D	I	D	A	R	L	I	E	I	A	K	Q	N	A	V	E	A	G	L	G	D	L	I	T	F	R	Q	L	Q	V	A	D	F	Q	T	.	.	.	.	.	.	.	E	D	E	Y	G	V	V	V	A	N	P	P	Y
Template Known Secondary structure						S															T	T		T	T		S							G	G	G				.	.	.	.	.	.	.				S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.								.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions