 |
Job Description | P60390 | Confidence | 69.90% | Date | Thu Jan 5 12:06:45 GMT 2012 |
Rank | 367 | Aligned Residues | 29 |
% Identity | 24% | Template | c3eg9A_ |
PDB info |
PDB header:protein transport | Chain: A: PDB Molecule:protein transport protein sec23a; |
PDBTitle: crystal structure of the mammalian copii-coat protein2 sec23/24 bound to the transport signal sequence of membrin
|
Resolution | 3.00 Å |
|
  |   |
215 | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | E | E | I | E | Q | A | L | K | S | S | L | N | V | L | A | P | G | G | R | L | S | I | I | S | F | H | S |
Query Conservation |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|
|
|   |   |
Template Sequence |   |
D | L | Q | A | L | K | E | S | M | Q | M | S | L | S | L | L | P | P | T | A | L | V | G | L | I | T | F | G | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T |
|  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|