Job Description P60390 Confidence 98.90% Date Thu Jan 5 12:06:45 GMT 2012 Rank 61 Aligned Residues 108 % Identity 19% Template c3c0kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:upf0064 protein yccw; PDBTitle: crystal structure of a ribosomal rna methyltranferase Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		E	N	Y	K	H	T	T	V	L	L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	D	.	.	.	.	.	.	P	R	F	S	I	I	H
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence																				.	.																						.	.																									.	.	.	.	.	.
Template Conservation																				.	.																						.	.
Template Sequence		T	G	Y	Y	L	D	Q	R	D	S	R	L	A	T	R	R	Y	V	.	.	E	N	K	R	V	L	N	C	F	S	Y	T	G	G	F	A	V	S	A	L	X	.	.	G	G	C	S	Q	V	V	S	V	D	T	S	Q	E	A	L	D	I	A	R	Q	N	V	E	L	N	K	L	D	L	S	K	A	E	F	V	R
Template Known Secondary structure		T	S	S		G	G	G												.	.	T	T							T		T	T	T									.	.	T	T		S							S															T	T			G	G	G
Template Predicted Secondary structure																				.	.																						.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K	I	D	G	I	L	L	D	.	.	.	L	G	V	S	S	P	Q	L	D	D	A	E	R	G	F
Query Conservation																											.	.	.
Alig confidence																.	.										.	.	.
Template Conservation																.	.
Template Sequence		D	D	V	F	K	L	L	R	T	Y	R	D	R	G	.	.	E	K	F	D	V	I	V	X	D	P	P	K	F	V	E	N	K	S	Q	L	X	G	A	C	R	G	Y
Template Known Secondary structure		S												T	T	.	.											S	S		S	S	T	T		S	S	S				T
Template Predicted Secondary structure																.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions