Job Description P60390 Confidence 98.16% Date Thu Jan 5 12:06:45 GMT 2012 Rank 194 Aligned Residues 90 % Identity 22% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		Y	K	H	T	T	V	L	L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	.	.	.	.	.	.	.	.	D	P	R	F	S	I	I	H
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence						.	.															.																					.																							.	.	.	.	.	.	.	.
Template Conservation						.	.															.																					.
Template Sequence		V	Y	H	E	.	.	V	L	G	H	T	S	L	C	S	H	P	K	P	E	.	R	V	L	I	I	G	G	G	D	G	G	V	L	R	E	V	L	R	H	G	.	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V
Template Known Secondary structure						.	.								T	T	S	S				.								T	T	S							T	T		T	.	T									S																	G	G	G	G		T	T
Template Predicted Secondary structure						.	.															.																					.
Template SS confidence
		80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K	I	D	G	I	L	L	D	L
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		G	D	G	L	A	F	V	R	Q	T	P	D	.	.	.	.	N	T	Y	D	V	V	I	I	D	T
Template Known Secondary structure		S								T	S		T	.	.	.	.	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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