Job Description P60390 Confidence 98.29% Date Thu Jan 5 12:06:45 GMT 2012 Rank 182 Aligned Residues 78 % Identity 13% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.
Query SS confidence																																																													.	.	.	.
Query Sequence		L	L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	D	.	.	.	.	P	R	F	S	I	I	H	G	P	F	S	A	L	G	E	Y	V
Query Conservation																																																													.	.	.	.
Alig confidence											.	.	.																						.	.	.																								.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation											.	.	.																						.	.	.																																					.	.	.	.	.	.	.	.
Template Sequence		L	V	R	K	V	S	E	L	V	.	.	.	E	G	E	K	I	L	D	M	Y	S	G	V	G	T	F	G	I	Y	L	A	K	.	.	.	R	G	F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.		S	S						T		T	T	T								T	.	.	.	T	T								S															T	T										T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.																						.	.	.																																					.	.	.	.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	D	L	I	G	K	I	D	G	I	L	L	D	L	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	R	E	V	S	V	K	G	F	D	T	V	I	V	D	P	P
Template Known Secondary structure		.	T	T				T	T		S
Template Predicted Secondary structure		.
Template SS confidence
			327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions