Job Description P60390 Confidence 29.16% Date Thu Jan 5 12:06:45 GMT 2012 Rank 456 Aligned Residues 71 % Identity 27% Template c2g5cD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus Resolution 1.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	.	.	.	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	R	F	S	I	I	H	G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K
Query Conservation																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	F	X	G	G	S	F	A	K	S	L	R	R	S	G	F	K	G	K	I	Y	G	Y	D	I	N	P	E	S	I	S	K	A	V	D	L	G	I	I	D	E	G	T	T	S	I	A	K	V	E	D	F	S	P	D	F	V	X	L	S	S	P	V	R	T	F	R	E	I	A	K	K	L	S	Y	I	L	S
Template Known Secondary structure		S		S													T	T			S							S											T	T	S		S				S		G	G	G	G	G	G	G			S						S		G	G	G												S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	G	I	L	L	D	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	A	T	V	T	D	Q	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions