Job Description P60390 Confidence 97.24% Date Thu Jan 5 12:06:45 GMT 2012 Rank 278 Aligned Residues 86 % Identity 8% Template c2cmgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of spermidine synthase from helicobacter2 pylori Resolution 2.0 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																	.	.	.	.
Query SS confidence																																																																	.	.	.	.
Query Sequence		K	H	T	T	V	L	L	D	E	A	V	N	G	L	N	I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	.	.	.	.	D	P	R	F	S	I	I	H	G	P	F	S	A
Query Conservation																																																																	.	.	.	.
Alig confidence					.	.														.																				.	.	.																							.	.	.	.
Template Conservation					.	.														.																				.	.	.
Template Sequence		E	S	E	.	.	L	L	A	H	M	G	G	C	T	K	K	E	L	.	K	E	V	L	I	V	D	G	F	D	L	E	L	A	H	Q	L	F	K	.	.	.	Y	D	T	H	I	D	F	V	Q	A	D	E	K	I	L	D	S	F	I	S	F	F	P	H	F	H	E	V	K	N	N	K	N	F	T	H	A	K	Q
Template Known Secondary structure					.	.								T	T	S	S			.							S	S										T	T	.	.	.	S	S								S						G	G	G	T	T	T	S	T	T						T		T	T					S	S
Template Predicted Secondary structure					.	.														.																				.	.	.
Template SS confidence
		58	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	E	Y	V	A	E	R	D	L	I	G	K	I	D	G	I	L	L	D	L
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		L	L	D	L	D	I	K	.	.	.	.	.	K	Y	D	L	I	F	C	L	Q
Template Known Secondary structure		G	G	G	S				.	.	.	.	.								S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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