Job Description P60390 Confidence 99.17% Date Thu Jan 5 12:06:45 GMT 2012 Rank 24 Aligned Residues 123 % Identity 35% Template c2as0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ph1915; PDBTitle: crystal structure of ph1915 (apc 5817): a hypothetical rna2 methyltransferase Resolution 1.80 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		I	R	P	D	G	I	Y	I	D	G	T	F	G	R	G	G	H	S	R	L	I	L	S	Q	L	G	E	E	G	R	L	L	A	I	D	R	D	P	Q	A	I	A	V	A	K	T	I	D	.	.	.	.	.	D	P	R	F	S	I	I	H	G	P	F	S	A	L	G	E	Y	V	A	E	R	D	L	I	G	K	I
Query Conservation																																																		.	.	.	.	.
Alig confidence																									.	.																								.	.	.	.	.																							.	.
Template Conservation																									.	.																																																			.	.
Template Sequence		V	Q	P	G	D	R	V	L	D	V	F	T	Y	T	G	G	F	A	I	H	A	A	I	.	.	A	G	A	D	E	V	I	G	I	D	K	S	P	R	A	I	E	T	A	K	E	N	A	K	L	N	G	V	E	D	R	X	K	F	I	V	G	S	A	F	E	E	X	E	K	L	Q	K	K	G	.	.	E	K	F
Template Known Secondary structure				T	T						T	T		T	T	T									.	.	T	T		S							S															T	T		G	G	G						S												T	T	.	.
Template Predicted Secondary structure																									.	.																																																			.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.			.	.	290
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	L	L	D	L	G	V	S	S	P	Q	L	D	D	A	E	R	G	F	S	F	M	R	D	G	P	L	D	M	R	M	D	P	T	R	G	Q	S	A	A	E	W	L	Q	T	A	E	E	A	D	I	A	W	V	L	K	T	Y	G	E	E	R	F	A	K	R	I	A	R	A	I	V	E	R	N	R	E	Q
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	V	V	L	D	P	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	T	R	T	K	E	L	A	E	V	V	A	A	A	T	P	V	K	D	K	F	K	H	P	A	T	R	T	F	Q	A	V	R	I	W	V	N	S	E	L	E	E	I	E	Q	A	L	K	S	S	L	N	V	L	A	P	G	G	R	L	S	I	I	S	F	H	S	L	E	D	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	Q	H	E	K	D	L	K	A	G	L	R	A	Y	F	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	A	G	L	N	L	V	K	D	G	G	I	L	V	T	C	S	C	S	Q	H	V	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	S	G	G	G												.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T														T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.															.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions