Return to main results Retrieve Phyre Job Id

Job DescriptionP09836
Confidence1.25%DateThu Jan 5 11:02:32 GMT 2012
Rank42Aligned Residues39
% Identity13%Templated3dtub2
SCOP infoTransmembrane helix hairpin Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   400.........410.........420.........430........
Predicted Secondary structure 








Query SS confidence 






































Query Sequence  LAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPRE
Query Conservation   
 
    
    
        
     
        
 
Alig confidence 






































Template Conservation   
  
  
      
   
 
 
   
       
    
Template Sequence  VATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRN
Template Known Secondary structure 
TTT
Template Predicted Secondary structure 


Template SS confidence 






































   50.........60.........70.........80........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions