Return to main results Retrieve Phyre Job Id

Job DescriptionP09836
Confidence100.00%DateThu Jan 5 11:02:32 GMT 2012
Rank1Aligned Residues419
% Identity37%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYFTRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKF
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Template Sequence  FKPAPHKARL. . PAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYL. VEQGFSRGDLGFALSGISIAYGFSKF
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   5....10.... .....20.........30.........40.........50..... ....60.........70.........80.
 
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Query Sequence  VSGIVSDRSNARYFMGIGLIATGIINILF. . . . GFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALW
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Template Sequence  IMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVW
Template Known Secondary structure  S

SSSSTTT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
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Query Sequence  NTAHNVGGALIPIVMAAAAL. HYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVGEWRHDALEIAQQQEGAGLTR
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Template Sequence  NCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSC. . . . . . . . . . . . . GLPPIEEYKNDTA
Template Known Secondary structure  TST

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   162.......170.........180.........190.........200.........210..... ....220........
 
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Query Sequence  KEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLYMSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNR
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Template Sequence  KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR
Template Known Secondary structure  TTSS
BTTBS


TSTT
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Query Sequence  GPMNLIFAAGILLSVGSLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYL. GASLAG
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Template Conservation                                      
                       
   
         
     
Template Sequence  GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAAS
Template Known Secondary structure  TTS

TT
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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   398.400.........410.........420.........430........
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Query Sequence  WPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPRE
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Template Sequence  AIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRH
Template Known Secondary structure  SS
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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